RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 ATP13A3Q9H7F0 1226 aa16.92■□□□□ 0.3
SCRN1-203ENST00000409570 SUDS3Q9H7L9 328 aaPredicted RBP16.92■□□□□ 0.3
SCRN1-203ENST00000409570 FZD10Q9ULW2 581 aa16.92■□□□□ 0.3
SCRN1-203ENST00000409570 MAN2B2Q9Y2E5 1009 aa16.92■□□□□ 0.3
SCRN1-203ENST00000409570 ST14Q9Y5Y6 855 aa16.92■□□□□ 0.3
SCRN1-203ENST00000409570 RP1L1Q8IWN7 2480 aaPredicted RBP16.92■□□□□ 0.3
SCRN1-203ENST00000409570 ZNF891A8MT65 544 aaPredicted RBP16.91■□□□□ 0.3
SCRN1-203ENST00000409570 PPM1DO15297 605 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 CCP110O43303 1012 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 CEACAM5P06731 702 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 THRAP10827 490 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 MYCLP1P12525 358 aaPredicted RBP16.91■□□□□ 0.3
SCRN1-203ENST00000409570 CSF2RBP32927 897 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 GPR3P46089 330 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 GSCP56915 257 aaPredicted RBP16.91■□□□□ 0.3
SCRN1-203ENST00000409570 HSP90AA4PQ58FG1 418 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 NKAIN2Q5VXU1 208 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 SCYL2Q6P3W7 929 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 NAGSQ8N159 534 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 OR4D9Q8NGE8 314 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 PTCD2Q8WV60 388 aaKnown RBP16.91■□□□□ 0.3
SCRN1-203ENST00000409570 SLC45A3Q96JT2 553 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 NSMCE3Q96MG7 304 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 ZNF71Q9NQZ8 489 aaPredicted RBP16.91■□□□□ 0.3
SCRN1-203ENST00000409570 OCIAD1Q9NX40 245 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 SLC39A1Q9NY26 324 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 TMEM9Q9P0T7 183 aa16.91■□□□□ 0.3
SCRN1-203ENST00000409570 IGHV1OR21-1A0A087WYE8 117 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 A8MX80 341 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 PDE2AO00408 941 aaPredicted RBP16.9■□□□□ 0.3
SCRN1-203ENST00000409570 NKX2-8O15522 239 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 ZW10O43264 779 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 DUX1O43812 170 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 GFPT2O94808 682 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 UNGP13051 313 aaPredicted RBP16.9■□□□□ 0.3
SCRN1-203ENST00000409570 MPSTP25325 297 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 CSTF2P33240 577 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCRN1-203ENST00000409570 ILF3Q12906 894 aaKnown RBP eCLIP16.9■□□□□ 0.33e-8■■■■■ 28.1
SCRN1-203ENST00000409570 SQSTM1Q13501 440 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 ACOX1Q15067 660 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 CAMK4Q16566 473 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 MLKLQ8NB16 471 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 CCDC112Q8NEF3 446 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 C9orf43Q8TAL5 461 aaPredicted RBP16.9■□□□□ 0.3
SCRN1-203ENST00000409570 CELF6Q96J87 481 aaKnown RBP16.9■□□□□ 0.3
SCRN1-203ENST00000409570 COQ10AQ96MF6 247 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 PSMG3-AS1Q96PY0 264 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 PCDHB18PQ96TA0 734 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 SELENOOQ9BVL4 669 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 TEX101Q9BY14 249 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 FRMD8Q9BZ67 464 aaPredicted RBP16.9■□□□□ 0.3
SCRN1-203ENST00000409570 SLC39A8Q9C0K1 460 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 GANQ9H2C0 597 aa16.9■□□□□ 0.3
SCRN1-203ENST00000409570 TRNAU1APQ9NX07 287 aaKnown RBP16.9■□□□□ 0.3
SCRN1-203ENST00000409570 B4E171 279 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 TRAFD1O14545 582 aaPredicted RBP16.89■□□□□ 0.29
SCRN1-203ENST00000409570 CAPN5O15484 640 aaPredicted RBP16.89■□□□□ 0.29
SCRN1-203ENST00000409570 FGF10O15520 208 aaPredicted RBP16.89■□□□□ 0.29
SCRN1-203ENST00000409570 TSPAN7P41732 249 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 GNPDA1P46926 289 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 NDST2P52849 883 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 BCL2L1Q07817 233 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 NCAPHQ15003 741 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 ANKS6Q68DC2 871 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 SLC30A9Q6PML9 568 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 TRIM72Q6ZMU5 477 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 HEATR4Q86WZ0 1026 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 NUS1Q96E22 293 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 ASPSCR1Q9BZE9 553 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 SPRY4Q9C004 299 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 PHPT1Q9NRX4 125 aaPredicted RBP16.89■□□□□ 0.29
SCRN1-203ENST00000409570 ADAM22Q9P0K1 906 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 B4GALT6Q9UBX8 382 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 PILRAQ9UKJ1 303 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 SUFUQ9UMX1 484 aa16.89■□□□□ 0.29
SCRN1-203ENST00000409570 MYO9AB2RTY4 2548 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 TCRBV5S1A1TA0A578 114 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 SIGLEC16A6NMB1 481 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 EFCAB7A8K855 629 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 PES1O00541 588 aaKnown RBP16.88■□□□□ 0.29
SCRN1-203ENST00000409570 PALMO75781 387 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 PAPOLAP51003 745 aaKnown RBP16.88■□□□□ 0.29
SCRN1-203ENST00000409570 ZNF143P52747 638 aaPredicted RBP16.88■□□□□ 0.29
SCRN1-203ENST00000409570 AIF1P55008 147 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 POLR2LP62875 67 aaKnown RBP16.88■□□□□ 0.29
SCRN1-203ENST00000409570 CTBSQ01459 385 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 BIRC2Q13490 618 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 CNGA3Q16281 694 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 DCAF12Q5T6F0 453 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 FAM26EQ8N5C1 309 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 BMPERQ8N8U9 685 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 C3orf20Q8ND61 904 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 DPYSL5Q9BPU6 564 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 PLAAQ9Y263 795 aa16.88■□□□□ 0.29
SCRN1-203ENST00000409570 LOC101059948A0A1B0GTJ6 334 aa16.87■□□□□ 0.29
SCRN1-203ENST00000409570 ARHGAP42A6NI28 874 aa16.87■□□□□ 0.29
SCRN1-203ENST00000409570 PRKAR1AP10644 381 aa16.87■□□□□ 0.29
SCRN1-203ENST00000409570 ADCY8P40145 1251 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms