RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PRAMEF14Q5SWL7 426 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 DENND2CQ68D51 928 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 HSD11B1LQ7Z5J1 315 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 OXR1Q8N573 874 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 RTP4Q96DX8 246 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 PPP1R2P1Q96PQ5 205 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 TM7SF3Q9NS93 570 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 A0A0U1RQS6 177 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 SPTY2D1-AS1A0A0U1RR47 76 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 A0A1B0GTQ1 180 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 ATP1A1P05023 1023 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 ETV3P41162 512 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 TNNT3P45378 269 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 CCT8P50990 548 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 INPP5AQ14642 412 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 CDKN3Q16667 212 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 LONRF2Q1L5Z9 754 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 ARHGEF18Q6ZSZ5 1173 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 Q6ZVL8 140 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 RAVER1Q8IY67 606 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 NUS1Q96E22 293 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 DTD2Q96FN9 168 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 MRGPRX2Q96LB1 330 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 GORASP1Q9BQQ3 440 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 MAGEE1Q9HCI5 957 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 AAR2Q9Y312 384 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 PCDHGB2Q9Y5G2 931 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 C1orf232A0A0U1RR37 186 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 GOLGA8CPA6NN73 597 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 YKT6O15498 198 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 PCDHGA12O60330 932 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 CLDN7O95471 211 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 CD59P13987 128 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 PSMB4P28070 264 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 ID4P47928 161 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 RXRGP48443 463 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 STC1P52823 247 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 GEMP55040 296 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 GDF10P55107 478 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 MTM1Q13496 603 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 PDE1CQ14123 709 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 PRPSAP1Q14558 356 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 DRICH1Q6PGQ1 229 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 KDM7AQ6ZMT4 941 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 TECPR1Q7Z6L1 1165 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 RASGEF1CQ8N431 466 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 IPMKQ8NFU5 416 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 SRPK1Q96SB4 655 aaKnown RBP19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 TTC7AQ9ULT0 858 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 ZNF148Q9UQR1 794 aa19.85■□□□□ 0.77
PDLIM2-207ENST00000409417 LRRK1Q38SD2 2015 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 PCCBP05166 539 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 ITGAVP06756 1048 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 ATXN1LP0C7T5 689 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 THOP1P52888 689 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 PTK2BQ14289 1009 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 FZD2Q14332 565 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 SUZ12Q15022 739 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 SHBQ15464 509 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 PARP6Q2NL67 630 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 P3H1Q32P28 736 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 ESRP1Q6NXG1 681 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 PLA2G15Q8NCC3 412 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 FSD1LQ9BXM9 530 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 KCND1Q9NSA2 647 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 HOMER3Q9NSC5 361 aa19.84■□□□□ 0.77
PDLIM2-207ENST00000409417 SPTBN2O15020 2390 aa19.83■□□□□ 0.77
PDLIM2-207ENST00000409417 HLA-DPA1P20036 260 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 TRIM23P36406 574 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 GNG11P61952 73 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 DPTQ07507 201 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 SNX1Q13596 522 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 SLC1A5Q15758 541 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 SIRPB2Q5JXA9 342 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 TPRG1LQ5T0D9 272 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 PNCKQ6P2M8 343 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 DBX2Q6ZNG2 339 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 PIP4P1Q86T03 277 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 PARGQ86W56 976 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 KLHDC8BQ8IXV7 354 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 NRSN1Q8IZ57 195 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 CCHCR1Q8TD31 782 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 OSBPL9Q96SU4 736 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 ZFYVE1Q9HBF4 777 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 SNX12Q9UMY4 172 aa19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 DRG1Q9Y295 367 aaKnown RBP19.83■□□□□ 0.76
PDLIM2-207ENST00000409417 C1SP09871 688 aa19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 PIRTP0C851 137 aa19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 RANBP10Q6VN20 620 aa19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 ZNF765Q7L2R6 523 aa19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 LYSMD3Q7Z3D4 306 aa19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 NLRP8Q86W28 1048 aa19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 COG1Q8WTW3 980 aa19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 NAP1L3Q99457 506 aaPredicted RBP19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 APOOQ9BUR5 198 aa19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 OR1A2Q9Y585 309 aa19.82■□□□□ 0.76
PDLIM2-207ENST00000409417 DCDC2BA2VCK2 349 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 RGSL1A5PLK6 1076 aa19.81■□□□□ 0.76
PDLIM2-207ENST00000409417 GOLGA6CA6NDK9 693 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms