RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SERPIND1P05546 499 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 TCF3P15923 654 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 GPC1P35052 558 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 GRM3Q14832 879 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 CERCAMQ5T4B2 595 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 RHBDF2Q6PJF5 856 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 AHSA2Q719I0 299 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 KATNAL1Q9BW62 490 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 TKTL2Q9H0I9 626 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 TLE6Q9H808 572 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 SCUBE2Q9NQ36 999 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 KLHL1Q9NR64 748 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 SIRPGQ9P1W8 387 aa17.69■□□□□ 0.42
SMPD4-202ENST00000409031 F5H5T6 163 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 IFRD1O00458 451 aaPredicted RBP17.68■□□□□ 0.42
SMPD4-202ENST00000409031 ALDH4A1P30038 563 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 OXCT1P55809 520 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 SLC22A16Q86VW1 577 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 XYLT1Q86Y38 959 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 LRRC49Q8IUZ0 686 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF395Q9H8N7 513 aaPredicted RBP17.68■□□□□ 0.42
SMPD4-202ENST00000409031 EFCAB9A8MZ26 197 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 UBXN8O00124 270 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 C4BPAP04003 597 aaKnown RBP17.68■□□□□ 0.42
SMPD4-202ENST00000409031 TGFB3P10600 412 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 RPL38P63173 70 aaKnown RBP17.68■□□□□ 0.42
SMPD4-202ENST00000409031 VEPH1Q14D04 833 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 PLEKHG6Q3KR16 790 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 DMRTB1Q96MA1 342 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 CSPG4P5Q96PW8 444 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 SMAD5Q99717 465 aaKnown RBP17.68■□□□□ 0.42
SMPD4-202ENST00000409031 ADAMTS6Q9UKP5 1117 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 ANKRD26Q9UPS8 1709 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 A0A1B0GVG6 124 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 H7C0S8 307 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 RAMP2O60895 175 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 ATF4P18848 351 aaPredicted RBP17.68■□□□□ 0.42
SMPD4-202ENST00000409031 ACSM2AQ08AH3 577 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 ACSM2BQ68CK6 577 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 STK40Q8N2I9 435 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 PHTF2Q8N3S3 785 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 IRF2BPLQ9H1B7 796 aa17.68■□□□□ 0.42
SMPD4-202ENST00000409031 FEN1P39748 380 aaKnown RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 SLC11A2P49281 568 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 TMBIM6P55061 237 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 TGFBIQ15582 683 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 USP43Q70EL4 1123 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 GPR180Q86V85 440 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 RIOX2Q8IUF8 465 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 TRUB1Q8WWH5 349 aaKnown RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 TP53INP1Q96A56 240 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 M0R2N6 131 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 SLC28A1O00337 649 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 ZBTB24O43167 697 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 CD48P09326 243 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 SKIV2LQ15477 1246 aaKnown RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 ERMP1Q7Z2K6 904 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 SELENOMQ8WWX9 145 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 NSMCE3Q96MG7 304 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 CHCHD6Q9BRQ6 235 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 A0A088AWK7 358 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 ELOVL7A1L3X0 281 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 FGF10O15520 208 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 HTRA2O43464 458 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 SCELO95171 688 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 PGLSO95336 258 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 BMP10O95393 424 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 OTCP00480 354 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 RAP2AP10114 183 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 COX7A2P14406 83 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 IFNGR2P38484 337 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 ADCK2Q7Z695 626 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 GALNT5Q7Z7M9 940 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 RALGPS2Q86X27 583 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 FSTL5Q8N475 847 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 DIRAS2Q96HU8 199 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 PRMT6Q96LA8 375 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 OR52B2Q96RD2 323 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 OR52E6Q96RD3 313 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF347Q96SE7 839 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 FAM126AQ9BYI3 521 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 CNTN6Q9UQ52 1028 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 PRLP01236 227 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 RPLP0P05388 317 aaKnown RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 TFPTP0C1Z6 253 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF182P17025 639 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-202ENST00000409031 TWIST2Q8WVJ9 160 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 FEM1AQ9BSK4 669 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 CCDC106Q9BWC9 280 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 TPK1Q9H3S4 243 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 ANKHQ9HCJ1 492 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 ACSS2Q9NR19 701 aa17.67■□□□□ 0.42
SMPD4-202ENST00000409031 H0YJX3 145 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 ITGB5P18084 799 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF773Q6PK81 442 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 STRADAQ7RTN6 431 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 TRPV3Q8NET8 790 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 ITCHQ96J02 903 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 MIEF1Q9NQG6 463 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 DNAJB9Q9UBS3 223 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms