RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 CDKN2AIPNLQ96HQ2 116 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 VPS39Q96JC1 886 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 EXOC2Q96KP1 924 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 NSMCE3Q96MG7 304 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 AGAP2Q99490 1192 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 SUV39H2Q9H5I1 410 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 UGT1A7Q9HAW7 530 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 UGT1A10Q9HAW8 530 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 UGT1A8Q9HAW9 530 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 INTS10Q9NVR2 710 aaKnown RBP9.82□□□□□ -0.84
POLR1A-202ENST00000409024 CLEC1BQ9P126 229 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 DEC1Q9P2X7 70 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 HECAQ9UBI9 543 aaPredicted RBP9.82□□□□□ -0.84
POLR1A-202ENST00000409024 MID2Q9UJV3 735 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 PLA2G4CQ9UP65 541 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 PCDHB9Q9Y5E1 797 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 PSAT1Q9Y617 370 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 MIA3Q5JRA6 1907 aa9.82□□□□□ -0.84
POLR1A-202ENST00000409024 A0A0J9YYE9 177 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 CCDC189A1A4V9 331 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TSPAN11A1L157 253 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TTC24A2A3L6 582 aaPredicted RBP9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TPP1O14773 563 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 KLF11O14901 512 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 STX7O15400 261 aaKnown RBP9.81□□□□□ -0.84
POLR1A-202ENST00000409024 MBTPS2O43462 519 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TULP3O75386 442 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 SPAG7O75391 227 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 PIAS1O75925 651 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TRBC1P01850 177 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 ALDOAP04075 364 aaKnown RBP9.81□□□□□ -0.84
POLR1A-202ENST00000409024 PDHA1P08559 390 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 LAMP2P13473 410 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 PSMC3P17980 439 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 CD9P21926 228 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 LTBRP36941 435 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 ETV4P43268 484 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 SUOXP51687 545 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 KPNA2P52292 529 aaKnown RBP9.81□□□□□ -0.84
POLR1A-202ENST00000409024 WDR4P57081 412 aaKnown RBP9.81□□□□□ -0.84
POLR1A-202ENST00000409024 RUNX3Q13761 415 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TYSND1Q2T9J0 566 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 CCDC153Q494R4 210 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 ATXN7L2Q5T6C5 722 aaPredicted RBP9.81□□□□□ -0.84
POLR1A-202ENST00000409024 LYPLAL1Q5VWZ2 237 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 LVRNQ6Q4G3 990 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 VITQ6UXI7 678 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 CERS6Q6ZMG9 384 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 SPATS2Q86XZ4 545 aaKnown RBP9.81□□□□□ -0.84
POLR1A-202ENST00000409024 CILP2Q8IUL8 1156 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TTC30BQ8N4P2 665 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 OR6P1Q8NGX9 317 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 DTX3LQ8TDB6 740 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 BCAS4Q8TDM0 211 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 FRS2Q8WU20 508 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 RSPRY1Q96DX4 576 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 SCRN2Q96FV2 425 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 MRGPRX3Q96LB0 322 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 ZNF317Q96PQ6 595 aaPredicted RBP9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TTC1Q99614 292 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 HEPHQ9BQS7 1158 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TM6SF2Q9BZW4 377 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 POPDC3Q9HBV1 291 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 RAD18Q9NS91 495 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 CATSPERZQ9NTU4 200 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 ELOVL2Q9NXB9 296 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 EPS15L1Q9UBC2 864 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 DKK3Q9UBP4 350 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 SLC2A6Q9UGQ3 507 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 EVLQ9UI08 416 aaPredicted RBP9.81□□□□□ -0.84
POLR1A-202ENST00000409024 TLK1Q9UKI8 766 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 PKP3Q9Y446 797 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 ARL5AQ9Y689 179 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 COMMD10Q9Y6G5 202 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 MYO15AQ9UKN7 3530 aa9.81□□□□□ -0.84
POLR1A-202ENST00000409024 A0A087X1B8 175 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 CAPN8A6NHC0 703 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 CD3EAPO15446 510 aaKnown RBP9.8□□□□□ -0.84
POLR1A-202ENST00000409024 LINC01565O15544 149 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 GJB3O75712 270 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 S1PR4O95977 384 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 IL1BP01584 269 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 STMN1P16949 149 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 ZNF30P17039 623 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 NBL1P41271 181 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 SLC1A2P43004 574 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 CTSOP43234 321 aaPredicted RBP9.8□□□□□ -0.84
POLR1A-202ENST00000409024 TTPAP49638 278 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 CCNHP51946 323 aaPredicted RBP9.8□□□□□ -0.84
POLR1A-202ENST00000409024 PRKAA2P54646 552 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 SLC12A2P55011 1212 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 ADARP55265 1226 aaKnown RBP9.8□□□□□ -0.84
POLR1A-202ENST00000409024 SIGLEC14Q08ET2 396 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 SMAD4Q13485 552 aaKnown RBP9.8□□□□□ -0.84
POLR1A-202ENST00000409024 BMPR2Q13873 1038 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 PDE1CQ14123 709 aaPredicted RBP9.8□□□□□ -0.84
POLR1A-202ENST00000409024 USP10Q14694 798 aaKnown RBP9.8□□□□□ -0.84
POLR1A-202ENST00000409024 ZKSCAN8Q15776 578 aaPredicted RBP9.8□□□□□ -0.84
POLR1A-202ENST00000409024 GEN1Q17RS7 908 aa9.8□□□□□ -0.84
POLR1A-202ENST00000409024 TSNAXIP1Q2TAA8 658 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms