RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 AGR3Q8TD06 166 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 ANKRD49Q8WVL7 239 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 CCDC126Q96EE4 140 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 PLK2Q9NYY3 685 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 KIAA1522Q9P206 1035 aaPredicted RBP24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 TAGLN3Q9UI15 199 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 LZTS1Q9Y250 596 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 IRAK3Q9Y616 596 aa24.68■■□□□ 1.54
DNMT3A-206ENST00000406659 BPTFQ12830 3046 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 A8MUI8 341 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 NRG2O14511 850 aaPredicted RBP24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 NPHS1O60500 1241 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 AP1S1P61966 158 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 UBAP2LQ14157 1087 aaKnown RBP24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 TMEM240Q5SV17 173 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 PIM3Q86V86 326 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 MRPL43Q8N983 215 aaKnown RBP24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 USP13Q92995 863 aaPredicted RBP24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 ACDQ96AP0 544 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 TCF12Q99081 682 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 HACD3Q9P035 362 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 ANKRD36A6QL64 1941 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 HIDE1A8MVS5 230 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 K7ERQ8 282 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 STX7O15400 261 aaKnown RBP24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 TLL1O43897 1013 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 WISP3O95389 354 aaPredicted RBP24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 CYBBP04839 570 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 CCR10P46092 362 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 GPR158Q5T848 1215 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 FIBINQ8TAL6 211 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 AARSD1Q9BTE6 412 aaKnown RBP24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 PCDHB9Q9Y5E1 797 aa24.67■■□□□ 1.54
DNMT3A-206ENST00000406659 UBA6A0AVT1 1052 aaPredicted RBP24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 PRR5-ARHGAP8B1AHC4 643 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 SPECC1L-ADORA2AF8WAN1 911 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 NDUFS3O75489 264 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 PRSS56P0CW18 603 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 ARHGAP8P85298 464 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 LMAN2Q12907 356 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 TMEM207Q6UWW9 146 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 TRIM67Q6ZTA4 783 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 PIWIL4Q7Z3Z4 852 aaKnown RBP24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 SPNS2Q8IVW8 549 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 SP7Q8TDD2 431 aaPredicted RBP24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 MIPEPQ99797 713 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 TM6SF2Q9BZW4 377 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 SMG9Q9H0W8 520 aaKnown RBP24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 POPDC3Q9HBV1 291 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 HCFC1R1Q9NWW0 138 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 NCKIPSDQ9NZQ3 722 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 ARHGAP26Q9UNA1 814 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 SLC4A7Q9Y6M7 1214 aa24.66■■□□□ 1.54
DNMT3A-206ENST00000406659 SLCO1B7G3V0H7 640 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 TFEBP19484 476 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 ARMC12Q5T9G4 340 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 LSMEM2Q8N112 164 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 TTC30BQ8N4P2 665 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 TEX9Q8N6V9 391 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 SH3RF2Q8TEC5 729 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 CADM1Q9BY67 442 aaKnown RBP24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 CCDC68Q9H2F9 335 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 POLR3BQ9NW08 1133 aaPredicted RBP24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 VTI1BQ9UEU0 232 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 LCHNA4D1U4 455 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 B2RBV5 119 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 F8W8V4 182 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 MATN2O00339 956 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 PFDN6O15212 129 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 HDAC3O15379 428 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 SNUPNO95149 360 aaKnown RBP24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 FGF19O95750 216 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 AOC1P19801 751 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 NCF2P19878 526 aaPredicted RBP24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 SERPINB5P36952 375 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 LBX1P52954 281 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 PDAP1Q13442 181 aaKnown RBP24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 SLC9B1Q4ZJI4 515 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 SEL1L3Q68CR1 1132 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 PSRC1Q6PGN9 363 aaPredicted RBP24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 MICAL1Q8TDZ2 1067 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 MYO19Q96H55 970 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 CNDP1Q96KN2 507 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 SHCBP1LQ9BZQ2 653 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 ALG9Q9H6U8 611 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 TAS2R1Q9NYW7 299 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 ZDHHC2Q9UIJ5 367 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 FKBPLQ9UIM3 349 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 CLEC4EQ9ULY5 219 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 VPS9D1Q9Y2B5 631 aa24.65■■□□□ 1.54
DNMT3A-206ENST00000406659 NEMP2A6NFY4 417 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 GSC2O15499 205 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 SMAD6O43541 496 aaKnown RBP24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 FZD6O60353 706 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 IPO13O94829 963 aaKnown RBP24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 FMO4P31512 558 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 MC4RP32245 332 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 CCR2P41597 374 aa24.64■■□□□ 1.53
DNMT3A-206ENST00000406659 CPA2P48052 419 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms