RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 HSPB2Q16082 182 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 KRT24Q2M2I5 525 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZNF628Q5EBL2 1059 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 SLC10A5Q5PT55 438 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 C6orf141Q5SZD1 244 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 KRT79Q5XKE5 535 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 AWAT2Q6E213 333 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 AAGABQ6PD74 315 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 LRIG3Q6UXM1 1119 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 SEPT14Q6ZU15 432 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 FAM47EQ6ZV65 393 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 TECPR1Q7Z6L1 1165 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 MRPL10Q7Z7H8 261 aaKnown RBP5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 CCDC25Q86WR0 208 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 TMC8Q8IU68 726 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 RNF168Q8IYW5 571 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 MINDY1Q8N5J2 469 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 HJURPQ8NCD3 748 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 MCPH1Q8NEM0 835 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 ATP6V1E2Q96A05 226 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZNF653Q96CK0 615 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 VMP1Q96GC9 406 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 TMEM68Q96MH6 324 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 ANKRD2Q9GZV1 360 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 MOV10Q9HCE1 1003 aaKnown RBP5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 ARGLU1Q9NWB6 273 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 WDR35Q9P2L0 1181 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 ANAPC2Q9UJX6 822 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 LSM4Q9Y4Z0 139 aaKnown RBP5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 CACNA1IQ9P0X4 2223 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 CLSPNQ9HAW4 1339 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 LOC102723996A0A087X1L8 192 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 TRBV5-3A0A0A0MS03 114 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 KCNAB3O43448 404 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 SLC25A17O43808 307 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 KLK8O60259 260 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 TMCC1O94876 653 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 TOMM40O96008 361 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 CD63P08962 238 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 PCNAP12004 261 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 IL7RP16871 459 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZNF182P17025 639 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 AGAP20933 346 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 CIITAP33076 1130 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 CXCR3P49682 368 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 LIG4P49917 911 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 CLCN3P51790 818 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 GRAPQ13588 217 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 MYBPC2Q14324 1141 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZSCAN23Q3MJ62 389 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 CRY2Q49AN0 593 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 LRRC8EQ6NSJ5 796 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 QSOX2Q6ZRP7 698 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 FAM57BQ71RH2 274 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 CYB5R4Q7L1T6 521 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 TSPAN33Q86UF1 283 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 ANKRD13BQ86YJ7 626 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZDHHC23Q8IYP9 409 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZNF548Q8NEK5 533 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 SECISBP2LQ93073 1101 aaKnown RBP5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 HMCESQ96FZ2 354 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 CLMNQ96JQ2 1002 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 PPP1R13BQ96KQ4 1090 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 DGAT2Q96PD7 388 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 PIMREGQ9BSJ6 248 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 KIFC3Q9BVG8 833 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 SCNM1Q9BWG6 230 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 HRH4Q9H3N8 390 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 OSGEPL1Q9H4B0 414 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 SLC8A2Q9UPR5 921 aa5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 EXO1Q9UQ84 846 aaKnown RBP5.04□□□□□ -1.6
HMGB1P13-201ENST00000406019 FLT1P17948 1338 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 LOC100509620A0A075B734 347 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 DDTLA6NHG4 134 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 FOXO6A8MYZ6 492 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZNF814B7Z6K7 855 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 PSMD10O75832 226 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 NTN1O95631 604 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 MYBL1P10243 752 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 UNGP13051 313 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 ACADLP28330 430 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 OAS2P29728 719 aaKnown RBP5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 THPOP40225 353 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 PIK3CAP42336 1068 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 GPR12P47775 334 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 DDR1Q08345 913 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 ACSM2AQ08AH3 577 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 STIM1Q13586 685 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 SNTB1Q13884 538 aaKnown RBP5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 TCTN1Q2MV58 587 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 USP41Q3LFD5 358 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 CDONQ4KMG0 1287 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 SGO1Q5FBB7 561 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 NUGGCQ68CJ6 796 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 ACSM2BQ68CK6 577 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 KRT80Q6KB66 452 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 CCDC186Q7Z3E2 898 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 SERPINA11Q86U17 422 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 NOXA1Q86UR1 476 aa5.03□□□□□ -1.6
HMGB1P13-201ENST00000406019 IGFN1Q86VF2 1251 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms