RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 TSPAN6O43657 245 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 PGLSO95336 258 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 ECEL1O95672 775 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 SEMA4FO95754 770 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 CPP00450 1065 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3HP0C7X1 549 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 ADRB3P13945 408 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 FDFT1P37268 417 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 COILP38432 576 aaPredicted RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 LMAN1P49257 510 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 SKOR1P84550 965 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 CFHR1Q03591 330 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 NIPAL4Q0D2K0 466 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 UGP2Q16851 508 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 WHAMMP3Q1A5X7 153 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 CCDC157Q569K6 752 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 DNTTIP2Q5QJE6 756 aaKnown RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3GQ6DHY5 549 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3CQ6IPX1 549 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 NEK5Q6P3R8 708 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 USP45Q70EL2 814 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 PARS2Q7L3T8 475 aaKnown RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 LURAP1LQ8IV03 231 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TBC1D3Q8IZP1 549 aaPredicted RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 ZCCHC9Q8N567 271 aaKnown RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 LSM14AQ8ND56 463 aaKnown RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 MNS1Q8NEH6 495 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 OR2T34Q8NGX1 318 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 CCHCR1Q8TD31 782 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 ARRDC3Q96B67 414 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 ECHDC3Q96DC8 303 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 SRPK1Q96SB4 655 aaKnown RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 RBM15Q96T37 977 aaKnown RBP eCLIP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 CDC6Q99741 560 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 GAREM1Q9H706 876 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 PCDH9Q9HC56 1237 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 PREBQ9HCU5 417 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 TM7SF3Q9NS93 570 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 SMARCAL1Q9NZC9 954 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 PHTF1Q9UMS5 762 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 COL5A1P20908 1838 aaPredicted RBP10.6□□□□□ -0.71
RPAIN-204ENST00000405578 ATMQ13315 3056 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 PTPN13Q12923 2485 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 MGAQ8IWI9 3026 aa10.6□□□□□ -0.71
RPAIN-204ENST00000405578 A0A1B0GTW7 788 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 FAM47DPA6NHR8 397 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 ERI2A8K979 691 aaKnown RBP10.59□□□□□ -0.71
RPAIN-204ENST00000405578 MEI4A8MW99 385 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 ESPNB1AK53 854 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 PYCARD-AS1I3L0S3 204 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 TRAFD1O14545 582 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-204ENST00000405578 FANCGO15287 622 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 FLRT2O43155 660 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 PLRG1O43660 514 aaKnown RBP10.59□□□□□ -0.71
RPAIN-204ENST00000405578 AP1G1O43747 822 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 PMPCBO75439 489 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 PCDH8O95206 1070 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 CER1O95813 267 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 EPOP01588 193 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 ZNF883P0CG24 379 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 CYP2A6P11509 494 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-204ENST00000405578 TIMP2P16035 220 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 PSMB4P28070 264 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 CD68P34810 354 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-204ENST00000405578 DRD3P35462 400 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 NUDT1P36639 197 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 KCNJ1P48048 391 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 GRIA4P48058 902 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 ADPRHP54922 357 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 GDF10P55107 478 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 CDK18Q07002 472 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 TRAF2Q12933 501 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 PPP1R7Q15435 360 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 PCSK7Q16549 785 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 WDR45BQ5MNZ6 344 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 PIP5KL1Q5T9C9 394 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 AGBL4Q5VU57 503 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 LRRC69Q6ZNQ3 347 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 SYDE1Q6ZW31 735 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-204ENST00000405578 PRPF39Q86UA1 669 aaKnown RBP10.59□□□□□ -0.71
RPAIN-204ENST00000405578 IPMKQ8NFU5 416 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 CADM4Q8NFZ8 388 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 SPATA22Q8NHS9 363 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 CXorf40AQ8TE69 158 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 FEM1CQ96JP0 617 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 GPR174Q9BXC1 333 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 TDRD1Q9BXT4 1180 aaKnown RBP10.59□□□□□ -0.71
RPAIN-204ENST00000405578 MIR1-1HGQ9H1L0 117 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 LRRC40Q9H9A6 602 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 RAB6BQ9NRW1 208 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 WSB2Q9NYS7 404 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-204ENST00000405578 SERGEFQ9UGK8 458 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 CHKBQ9Y259 395 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 BTBD3Q9Y2F9 522 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 DOCK4Q8N1I0 1966 aa10.59□□□□□ -0.71
RPAIN-204ENST00000405578 NUMA1Q14980 2115 aa10.58□□□□□ -0.72
RPAIN-204ENST00000405578 F5H423 210 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-204ENST00000405578 PLK4O00444 970 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms