RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 MDM4O15151 490 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ARHGEF9O43307 516 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 MGRN1O60291 552 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 NDST3O95803 873 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 NR2F1P10589 423 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 S100GP29377 79 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 NUP62P37198 522 aaPredicted RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 SLC11A1P49279 550 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 DLG2Q15700 870 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 PTPRNQ16849 979 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 FAM98BQ52LJ0 330 aaKnown RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 FGD3Q5JSP0 725 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 FNBP1LQ5T0N5 605 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 DUPD1Q68J44 220 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 BRAT1Q6PJG6 821 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 FAR1Q8WVX9 515 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 FAM83CQ9BQN1 747 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 NDUFAF1Q9Y375 327 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ENTPD5O75356 428 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ULK1O75385 1050 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 SERPINE1P05121 402 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 RARAP10276 462 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ELK3P41970 407 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 RABGGTBP53611 331 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 FAM153CQ494X1 144 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 N4BP2L1Q5TBK1 243 aaPredicted RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 TRIM40Q6P9F5 258 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 CHST15Q7LFX5 561 aaPredicted RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 C7orf57Q8NEG2 295 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 RNASE11Q8TAA1 199 aaKnown RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 UGT2B28Q9BY64 529 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 RIBC2Q9H4K1 309 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 CARS2Q9HA77 564 aaKnown RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 FBXO6Q9NRD1 293 aaPredicted RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 INTS10Q9NVR2 710 aaKnown RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 FCF1Q9Y324 198 aaKnown RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 TRBV23OR9-2A0A075B6M9 112 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 TMX2-CTNND1H3BSU7 103 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 WNT9AO14904 365 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ERCC2P18074 760 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 SCNN1AP37088 669 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 POLD2P49005 469 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 MAXP61244 160 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 LPIN1Q14693 890 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 LRRC23Q53EV4 343 aaPredicted RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 IGSF21Q96ID5 467 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 TAPBPLQ9BX59 468 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 MAT2BQ9NZL9 334 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 SERTAD3Q9UJW9 196 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 COPG1Q9Y678 874 aaKnown RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 IGKV6D-41A0A0C4DH26 115 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 A0A1B0GW55 424 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ENPP3O14638 875 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 DUX4L2P0CJ85 424 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 DUX4L3P0CJ86 424 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 DUX4L4P0CJ87 422 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 DUX4L5P0CJ88 424 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 DUX4L6P0CJ89 424 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 DUX4L7P0CJ90 424 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ALADP13716 330 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 NT5EP21589 574 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 POU1F1P28069 291 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 FEN1P39748 380 aaKnown RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 VAC14Q08AM6 782 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ARSIQ5FYB1 569 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 ANO7Q6IWH7 933 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 CDC73Q6P1J9 531 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 OR4A15Q8NGL6 344 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 RMND5BQ96G75 393 aaPredicted RBP7.95□□□□□ -1.14
USP47-203ENST00000399455 CDADC1Q9BWV3 514 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 DUX4Q9UBX2 424 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 CYP8B1Q9UNU6 501 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 NWD2Q9ULI1 1742 aa7.95□□□□□ -1.14
USP47-203ENST00000399455 LRP6O75581 1613 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 SCN2BO60939 215 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 F2P00734 622 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 ACTR3P61158 418 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 AMZ2Q86W34 360 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 MMAAQ8IVH4 418 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 PARP9Q8IXQ6 854 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 SAMD14Q8IZD0 417 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 Q8N9G6 341 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 DQX1Q8TE96 717 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 DLG3Q92796 817 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 ALG9Q9H6U8 611 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CAB39Q9Y376 341 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 NOL4O94818 638 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CFHP08603 1231 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 SOX6P35712 828 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 SLC29A2Q14542 456 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 PFKFB4Q16877 469 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 DGKKQ5KSL6 1271 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 OXR1Q8N573 874 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 FBXO15Q8NCQ5 510 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 PIGKQ92643 395 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CENPTQ96BT3 561 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CRELD1Q96HD1 420 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 C12orf66Q96MD2 445 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 OLFM3Q96PB7 478 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 SH3GL3Q99963 347 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms