RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 SPHK2Q9NRA0 654 aa9.46□□□□□ -0.9
LINC00243-201ENST00000399196 HEY2Q9UBP5 337 aa9.46□□□□□ -0.9
LINC00243-201ENST00000399196 PCDHGC4Q9Y5F7 938 aa9.46□□□□□ -0.9
LINC00243-201ENST00000399196 WNT6Q9Y6F9 365 aa9.46□□□□□ -0.9
LINC00243-201ENST00000399196 ANKRD12Q6UB98 2062 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 UNC80Q8N2C7 3258 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 K7ERQ8 282 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 PAPSS2O95340 614 aaPredicted RBP9.45□□□□□ -0.9
LINC00243-201ENST00000399196 MPOP05164 745 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 CPA3P15088 417 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 TARSP26639 723 aaKnown RBP9.45□□□□□ -0.9
LINC00243-201ENST00000399196 CCR10P46092 362 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 ARFIP2P53365 341 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 ACVR1Q04771 509 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 NSUN2Q08J23 767 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC00243-201ENST00000399196 USP4Q13107 963 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 SLC12A1Q13621 1099 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 TAF1BQ53T94 588 aaPredicted RBP9.45□□□□□ -0.9
LINC00243-201ENST00000399196 RARS2Q5T160 578 aaKnown RBP9.45□□□□□ -0.9
LINC00243-201ENST00000399196 ATG16L1Q676U5 607 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 CLNKQ7Z7G1 428 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 ALYREFQ86V81 257 aaKnown RBP9.45□□□□□ -0.9
LINC00243-201ENST00000399196 CILP2Q8IUL8 1156 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 ZNF557Q8N988 423 aaPredicted RBP9.45□□□□□ -0.9
LINC00243-201ENST00000399196 MDGA1Q8NFP4 955 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 VN1R2Q8NFZ6 395 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 IRF7Q92985 503 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 NXNL1Q96CM4 212 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 LRCH3Q96II8 777 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 TMEM237Q96Q45 408 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 CDCA3Q99618 268 aaPredicted RBP9.45□□□□□ -0.9
LINC00243-201ENST00000399196 APOL5Q9BWW9 433 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 ADGRE3Q9BY15 652 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 TM6SF2Q9BZW4 377 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 LINC00597Q9H2U6 94 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 ZNF576Q9H609 170 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC00243-201ENST00000399196 LHX3Q9UBR4 397 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 RAI2Q9Y5P3 530 aa9.45□□□□□ -0.9
LINC00243-201ENST00000399196 MYO9BQ13459 2157 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 ZNF195O14628 629 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 UNC5CO95185 931 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 S1PR4O95977 384 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 TYRP14679 529 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 LEPRP48357 1165 aaKnown RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 CD151P48509 253 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 SLC1A6P48664 564 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 PRAMEP78395 509 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 TIAL1Q01085 375 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 TRAF2Q12933 501 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 UGP2Q16851 508 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 PITRM1Q5JRX3 1037 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 LY6G5CQ5SRR4 150 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 ATXN7L2Q5T6C5 722 aaPredicted RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 TMEM207Q6UWW9 146 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 RAPH1Q70E73 1250 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 METTL3Q86U44 580 aaKnown RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 FSTL5Q8N475 847 aaPredicted RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 LPCAT1Q8NF37 534 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 OR6P1Q8NGX9 317 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 RAB3IL1Q8TBN0 382 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 CALML6Q8TD86 181 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 UTP4Q969X6 686 aaKnown RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 VOPP1Q96AW1 172 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 SLC7A6OSQ96CW6 309 aaPredicted RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 OTUB2Q96DC9 234 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 FAM167BQ9BTA0 163 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 TDRD1Q9BXT4 1180 aaKnown RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 MFSD1Q9H3U5 465 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 NMRAL1Q9HBL8 299 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 DZANK1Q9NVP4 752 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 PNPOQ9NVS9 261 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 THAP1Q9NVV9 213 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 HAO1Q9UJM8 370 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 DNAJC16Q9Y2G8 782 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 CCDC162PA2VCL2 907 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 SLC7A4O43246 635 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 SMAD6O43541 496 aaKnown RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 WISP3O95389 354 aaPredicted RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 CRTAMO95727 393 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 GOT2P00505 430 aaKnown RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 PENKP01210 267 aaPredicted RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 SERPINE1P05121 402 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 RALBP11234 206 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 FSHRP23945 695 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 HLA-FP30511 346 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 SLC8A1P32418 973 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 EPHB1P54762 984 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 RAB10P61026 200 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 AP1S1P61966 158 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 TUBB3Q13509 450 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 GRIN2CQ14957 1233 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 CCDC153Q494R4 210 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 RALGPS1Q5JS13 557 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 ZNF549Q6P9A3 640 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 NCEH1Q6PIU2 408 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 TBC1D1Q86TI0 1168 aaPredicted RBP9.44□□□□□ -0.9
LINC00243-201ENST00000399196 TRIM42Q8IWZ5 723 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 ADGRG2Q8IZP9 1017 aa9.44□□□□□ -0.9
LINC00243-201ENST00000399196 RYBPQ8N488 228 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms