RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 PGBD5Q8N414 524 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 ZFRQ96KR1 1074 aaKnown RBP19.55■□□□□ 0.72
COL13A1-205ENST00000398978 SP110Q9HB58 689 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 PREBQ9HCU5 417 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 TSR3Q9UJK0 312 aaKnown RBP19.55■□□□□ 0.72
COL13A1-205ENST00000398978 TIMM22Q9Y584 194 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 H3BMM5 538 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 RBP1P09455 135 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 CAPN3P20807 821 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 IMPDH1P20839 514 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 CASP2P42575 452 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 PRKCQQ04759 706 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 EFEMP1Q12805 493 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 GNASQ5JWF2 1037 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 MARC1Q5VT66 337 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 ZNF549Q6P9A3 640 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 AFAP1L2Q8N4X5 818 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 RANBP9Q96S59 729 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 SLC25A23Q9BV35 468 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 SLC25A51Q9H1U9 297 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 TBC1D13Q9NVG8 400 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 NDUFA13Q9P0J0 144 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 TMEM181Q9P2C4 612 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 MAP10Q9P2G4 905 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 CEPT1Q9Y6K0 416 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 FGF10O15520 208 aaPredicted RBP19.55■□□□□ 0.72
COL13A1-205ENST00000398978 HTRA2O43464 458 aaPredicted RBP19.55■□□□□ 0.72
COL13A1-205ENST00000398978 MTHFD1P11586 935 aaKnown RBP19.55■□□□□ 0.72
COL13A1-205ENST00000398978 CLCN5P51795 746 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 ACAP2Q15057 778 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 ZNF597Q96LX8 424 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 EPB41L1Q9H4G0 881 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 SOX17Q9H6I2 414 aaPredicted RBP19.55■□□□□ 0.72
COL13A1-205ENST00000398978 FAM50BQ9Y247 325 aa19.55■□□□□ 0.72
COL13A1-205ENST00000398978 LAMA2P24043 3122 aaKnown RBP19.54■□□□□ 0.72
COL13A1-205ENST00000398978 STX1BP61266 288 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 FUT11Q495W5 492 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 TIGD7Q6NT04 549 aaPredicted RBP19.54■□□□□ 0.72
COL13A1-205ENST00000398978 TTC9BQ8N6N2 239 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 MYEOVQ96EZ4 313 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 IMP4Q96G21 291 aaKnown RBP19.54■□□□□ 0.72
COL13A1-205ENST00000398978 SMOC2Q9H3U7 446 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 SEMA4BQ9NPR2 832 aaPredicted RBP19.54■□□□□ 0.72
COL13A1-205ENST00000398978 OLAHQ9NV23 265 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 USP22Q9UPT9 525 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 DMTF1Q9Y222 760 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 TCRBV3S1A0A5B6 114 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 B4GALT3O60512 393 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 CDK14O94921 469 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 NCK1P16333 377 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 OXTRP30559 389 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 MAP2K5Q13163 448 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 MAPRE2Q15555 327 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 PLA2G4EQ3MJ16 856 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 RAP1GAP2Q684P5 730 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 CBR4Q8N4T8 237 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 IGSF8Q969P0 613 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 VPS33AQ96AX1 596 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 PRKD2Q9BZL6 878 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 POLR3BQ9NW08 1133 aaPredicted RBP19.54■□□□□ 0.72
COL13A1-205ENST00000398978 TRPV2Q9Y5S1 764 aa19.54■□□□□ 0.72
COL13A1-205ENST00000398978 A0A0U1RQS6 177 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 FOXD2O60548 495 aaPredicted RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 GOT2P00505 430 aaKnown RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 CDH2P19022 906 aaPredicted RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 GPX3P22352 226 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 SLC7A1P30825 629 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 NR1H2P55055 460 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 DIO3P55073 304 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 MLLT6P55198 1093 aaPredicted RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 BRMS1LQ5PSV4 323 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 CPNE9Q8IYJ1 553 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 RSPH1Q8WYR4 309 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 TUBGCP3Q96CW5 907 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 TSPAN18Q96SJ8 248 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 CYP2S1Q96SQ9 504 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 PARK7Q99497 189 aaKnown RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 PKMYT1Q99640 499 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 DUS2Q9NX74 493 aaKnown RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 UBA6A0AVT1 1052 aaPredicted RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 TMX2-CTNND1H3BSU7 103 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 ACVRL1P37023 503 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 HSPA13P48723 471 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 ZNF135P52742 658 aaPredicted RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 UGT3A2Q3SY77 523 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 HABP4Q5JVS0 413 aaKnown RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 SAMD4BQ5PRF9 694 aaKnown RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 TBCELQ5QJ74 424 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 TMEM126BQ8IUX1 230 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 LZTR1Q8N653 840 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 DNAJB14Q8TBM8 379 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 PTCD2Q8WV60 388 aaKnown RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 NUDT8Q8WV74 236 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 TWIST2Q8WVJ9 160 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 TUBB1Q9H4B7 451 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 MRM3Q9HC36 420 aaKnown RBP19.53■□□□□ 0.72
COL13A1-205ENST00000398978 ATXN10Q9UBB4 475 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 PADI3Q9ULW8 664 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 MUSKO15146 869 aa19.53■□□□□ 0.72
COL13A1-205ENST00000398978 ZNF189O75820 626 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms