RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 CDH4P55283 916 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 DSTNP60981 165 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 RPS7P62081 194 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 DPYSQ14117 519 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 KYNUQ16719 465 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 ARSJQ5FYB0 599 aaPredicted RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 TRIM68Q6AZZ1 485 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 RGMBQ6NW40 437 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PRR23CQ6ZRP0 262 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PID1Q7Z2X4 250 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PLD6Q8N2A8 252 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 FBXO39Q8N4B4 442 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 GPR156Q8NFN8 814 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 NINJ1Q92982 152 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 FATE1Q969F0 183 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 ZNF599Q96NL3 588 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 HNRNPABQ99729 332 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 LPIN3Q9BQK8 851 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 SLC25A23Q9BV35 468 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PCDH9Q9HC56 1237 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PAK1IP1Q9NWT1 392 aaPredicted RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 RCOR1Q9UKL0 485 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 ACOT9Q9Y305 439 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 KCNE2Q9Y6J6 123 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 DNMT3AQ9Y6K1 912 aaPredicted RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 A0A0G2JND7 137 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 RAD51CO43502 376 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 ABCB7O75027 752 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PGM3O95394 542 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 VNN2O95498 520 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PRG2P13727 222 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 BMP7P18075 431 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 DSG3P32926 999 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 CLCN7P51798 805 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 CRISP1P54107 249 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PER3P56645 1201 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PSMC6P62333 389 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 SP2Q02086 613 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 POU4F2Q12837 409 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PTK7Q13308 1070 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 KCNC3Q14003 757 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 ZNF169Q14929 603 aaPredicted RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 ACAP2Q15057 778 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 SMU1Q2TAY7 513 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 ZBTB41Q5SVQ8 909 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 TSHZ3Q63HK5 1081 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 C14orf80Q86SX3 495 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 EPHX4Q8IUS5 362 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 EGFL6Q8IUX8 553 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 RBM12BQ8IXT5 1001 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 SLC15A3Q8IY34 581 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PDPRQ8NCN5 879 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 KBTBD7Q8WVZ9 684 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 S100ZQ8WXG8 99 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 SHC3Q92529 594 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 RFT1Q96AA3 541 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 BMFQ96LC9 184 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 HIST1H2AAQ96QV6 131 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 RBM12Q9NTZ6 932 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 ZSWIM5Q9P217 1185 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 IFT80Q9P2H3 777 aaPredicted RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 PDP2Q9P2J9 529 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 HELZP42694 1942 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 LOC100653049A0A140TA62 436 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 OR2AG2A6NM03 316 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 GTPBP1O00178 669 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 TSPAN3O60637 253 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 C8BP07358 591 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 PCNAP12004 261 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 IDSP22304 550 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 TNFSF4P23510 183 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 TARSP26639 723 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 SLC1A2P43004 574 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 CCR4P51679 360 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 GAD2Q05329 585 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 ACTN3Q08043 901 aaPredicted RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 NECTIN1Q15223 517 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 SYT16Q17RD7 645 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 TIGD2Q4W5G0 525 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 SPIN4Q56A73 249 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 ALG10Q5BKT4 473 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 CDKAL1Q5VV42 579 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 KDELC2Q7Z4H8 507 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 FUKQ8N0W3 1084 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 CARNMT1Q8N4J0 409 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 SMG7Q92540 1137 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 FAM84BQ96KN1 310 aaPredicted RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 USB1Q9BQ65 265 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 COPS4Q9BT78 406 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 NDC1Q9BTX1 674 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 CDADC1Q9BWV3 514 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 TMEM121BQ9BXQ6 578 aaPredicted RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 MANSC1Q9H8J5 431 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 ATP13A1Q9HD20 1204 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 WDR6Q9NNW5 1121 aaKnown RBP2.73□□□□□ -1.97
CHD9-202ENST00000398510 GDE1Q9NZC3 331 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 GMEB1Q9Y692 573 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 C5orf60A6NFR6 353 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 D6RAR5 112 aa2.73□□□□□ -1.97
CHD9-202ENST00000398510 MED26O95402 600 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms