RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 CISD3P0C7P0 127 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 FTH1P19P0C7X4 201 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 LCP1P13796 627 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 CHN1P15882 459 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 GPD1P21695 349 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 DRD4P21917 467 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TGM2P21980 687 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 CORO1AP31146 461 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 RFC1P35251 1148 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 CHKAP35790 457 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 WASP42768 502 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 MAGEA4P43358 317 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PTPN9P43378 593 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ACADSBP45954 432 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 MMP16P51512 607 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ARSEP51690 589 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PPIDQ08752 370 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TRIP6Q15654 476 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 KLHL38Q2WGJ6 581 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 P3H1Q32P28 736 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 HSF5Q4G112 596 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 USP39Q53GS9 565 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 EOGTQ5NDL2 527 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ZFYVE27Q5T4F4 411 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 BSPRYQ5W0U4 402 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 OR52E8Q6IFG1 317 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ANO7Q6IWH7 933 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PMF1Q6P1K2 205 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 NLRP9Q7RTR0 991 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 BHLHA9Q7RTU4 235 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PHLDB2Q86SQ0 1253 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 RASSF3Q86WH2 238 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PSTKQ8IV42 348 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 DENND1CQ8IV53 801 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PPIL6Q8IXY8 311 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TMEFF1Q8IYR6 380 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 SIX6OS1Q8N1H7 587 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TERB1Q8NA31 727 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 MDGA1Q8NFP4 955 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 EPS8L3Q8TE67 593 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 RNF139Q8WU17 664 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 SLC35F5Q8WV83 523 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 KCTD13Q8WZ19 329 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 EDEM1Q92611 657 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ARHGEF2Q92974 986 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 HAUS1Q96CS2 278 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 RTP4Q96DX8 246 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 P2RY11Q96G91 374 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 SEC16BQ96JE7 1060 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 FRMD6Q96NE9 622 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 RAB3IPQ96QF0 476 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 CPXM1Q96SM3 734 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 RBM15Q96T37 977 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 SPSB2Q99619 263 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 GTPBP2Q9BX10 602 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 HEMGNQ9BXL5 484 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PRORYQ9H606 182 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 CLK4Q9HAZ1 481 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TIMMDC1Q9NPL8 285 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PPANQ9NQ55 473 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PLK2Q9NYY3 685 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 SAMD15Q9P1V8 674 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ZMAT5Q9UDW3 170 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 SFMBT1Q9UHJ3 866 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 AGO1Q9UL18 857 aaKnown RBP6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 HCN2Q9UL51 889 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 DNPEPQ9ULA0 475 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 LRCH1Q9Y2L9 728 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 L3MBTL1Q9Y468 752 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PCDHB11Q9Y5F2 797 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PLXND1Q9Y4D7 1925 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TEX15Q9BXT5 2789 aa6.52□□□□□ -1.37
SMARCE1P6-201ENST00000398372 MGAQ8IWI9 3026 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TCRBV21S2A2A0A5A6 115 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TLDC2A0PJX2 215 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TRABD2BA6NFA1 517 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 YJEFN3A6XGL0 299 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TTC34A8MYJ7 566 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 FAM25EA8MYX2 175 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PRRT4C9JH25 899 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 EIF3FO00303 357 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 MATN2O00339 956 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 PRPF4O43172 522 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 IDH3BO43837 385 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 CST8O60676 142 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 CBFA2T3O75081 653 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 FAM155BO75949 473 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ALDH1A2O94788 518 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ACSL3O95573 720 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 TRUB2O95900 331 aaKnown RBP6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ITPKAP23677 461 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 GSTT1P30711 240 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 DGKGP49619 791 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 MTTPP55157 894 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 POLE2P56282 527 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 ARL4CP56559 192 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 GEMIN4P57678 1058 aaKnown RBP6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 DAOAP59103 153 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 GSTM4Q03013 218 aa6.51□□□□□ -1.37
SMARCE1P6-201ENST00000398372 LMAN2Q12907 356 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms