RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 CDADC1Q9BWV3 514 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 SNX10Q9Y5X0 201 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 MFSD11O43934 449 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 CST3P01034 146 aaPredicted RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 FBXL16Q8N461 479 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 SLC9A6Q92581 669 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 PPCDCQ96CD2 204 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 KCTD15Q96SI1 283 aaPredicted RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 TMEM216Q9P0N5 145 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 MRPS33Q9Y291 106 aaKnown RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 SALL3Q9BXA9 1300 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 A0A1B0GW55 424 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 DUX4L2P0CJ85 424 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 DUX4L3P0CJ86 424 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 DUX4L4P0CJ87 422 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 DUX4L5P0CJ88 424 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 DUX4L6P0CJ89 424 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 DUX4L7P0CJ90 424 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 PAX3P23760 479 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 ALDH4A1P30038 563 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 CCNIQ14094 377 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 DGCR6Q14129 220 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 CHSY3Q70JA7 882 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 NMD3Q96D46 503 aaKnown RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 SLC25A23Q9BV35 468 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 LMAN2LQ9H0V9 348 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 DUX4Q9UBX2 424 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 MYBL2P10244 700 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 PIK3R1P27986 724 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 DGKGP49619 791 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 ZNF844Q08AG5 666 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 MSLNQ13421 630 aaPredicted RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 TRIM16LQ309B1 348 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 SNX15Q9NRS6 342 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 PRNPP04156 253 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 CDK7P50613 346 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 SPIBQ01892 262 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 RPTNQ6XPR3 784 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 PARP8Q8N3A8 854 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 HNRNPLLQ8WVV9 542 aaKnown RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 CPXM1Q96SM3 734 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 HSD17B14Q9BPX1 270 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 FNDC11Q9BVV2 318 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 FGFBP2Q9BYJ0 223 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 CAP1Q01518 475 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 RSBN1Q5VWQ0 802 aaPredicted RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 GAL3ST4Q96RP7 486 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 ERVW-1Q9UQF0 538 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 SLC28A1O00337 649 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 ADSLP30566 484 aaPredicted RBP11.35□□□□□ -0.59
TTC28-201ENST00000397906 GDI1P31150 447 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 ILF2Q12905 390 aaKnown RBP11.35□□□□□ -0.59
TTC28-201ENST00000397906 FBXO15Q8NCQ5 510 aaPredicted RBP11.35□□□□□ -0.59
TTC28-201ENST00000397906 XPR1Q9UBH6 696 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 TRIM24O15164 1050 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 CBX6O95503 412 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.35□□□□□ -0.59
TTC28-201ENST00000397906 ARSHQ5FYA8 562 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 ZBTB2Q8N680 514 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 BEND7Q8N7W2 519 aaPredicted RBP11.35□□□□□ -0.59
TTC28-201ENST00000397906 OR7D4Q8NG98 312 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 FUT8Q9BYC5 575 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 PRAMEF1O95521 474 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 LMO2P25791 158 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 PARP15Q460N3 678 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 CCNYL2Q5T2Q4 361 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 C9orf64Q5T6V5 341 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 TMCO1Q9UM00 188 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 PCDHGC4Q9Y5F7 938 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 STON1Q9Y6Q2 735 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 TAS2R41P59536 307 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 DSC2Q02487 901 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 ARMC4Q5T2S8 1044 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 INTS11Q5TA45 600 aaKnown RBP11.35□□□□□ -0.59
TTC28-201ENST00000397906 CCDC185Q8N715 623 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 DGCR6LQ9BY27 220 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 ZNF624Q9P2J8 865 aaPredicted RBP11.35□□□□□ -0.59
TTC28-201ENST00000397906 KLHL18O94889 574 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 ELP6Q0PNE2 266 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 EPS8L2Q9H6S3 715 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 WNT7AO00755 349 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 ITGAVP06756 1048 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 HOXB8P17481 243 aaPredicted RBP11.35□□□□□ -0.59
TTC28-201ENST00000397906 XYLT1Q86Y38 959 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 OFCC1Q8IZS5 231 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 TSTD1Q8NFU3 115 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 TEKT5Q96M29 485 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 OR52E6Q96RD3 313 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 OR10H3O60404 316 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 UBAP2LQ14157 1087 aaKnown RBP11.35□□□□□ -0.59
TTC28-201ENST00000397906 TRIQKQ629K1 86 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 CAPN13Q6MZZ7 669 aaPredicted RBP11.35□□□□□ -0.59
TTC28-201ENST00000397906 LRRN4CLQ8ND94 238 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 CD101Q93033 1021 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 PRDM16Q9HAZ2 1276 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 FBXW2Q9UKT8 454 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 OGDHLQ9ULD0 1010 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 CPED1A4D0V7 1026 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 GNSP15586 552 aa11.35□□□□□ -0.59
TTC28-201ENST00000397906 GRIA3P42263 894 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms