RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ARL13AQ5H913 290 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-205ENST00000397611 SPANXN2Q5MJ10 180 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 VWA5B1Q5TIE3 1220 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 NEPROQ6NW34 567 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 SVOPQ8N4V2 548 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 OTUD5Q96G74 571 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 APOL2Q9BQE5 337 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 COLEC11Q9BWP8 271 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM245Q9H330 911 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 ARMC7Q9H6L4 198 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 TRMT13Q9NUP7 481 aaKnown RBP5.46□□□□□ -1.54
PTPRD-205ENST00000397611 SPATA2Q9UM82 520 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 AP1M2Q9Y6Q5 423 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 A0A1B0GW55 424 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 FAM149AA5PLN7 773 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 WASH4PA8MWX3 477 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 AVILO75366 819 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 TIPRLO75663 272 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 DUX4L2P0CJ85 424 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 DUX4L3P0CJ86 424 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 DUX4L4P0CJ87 422 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 DUX4L5P0CJ88 424 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 DUX4L6P0CJ89 424 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 DUX4L7P0CJ90 424 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 RPL9P32969 192 aaKnown RBP5.46□□□□□ -1.54
PTPRD-205ENST00000397611 AKR1D1P51857 326 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 CA9Q16790 459 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PPP1R26Q5T8A7 1209 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-205ENST00000397611 AGAP9Q5VTM2 703 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 UMODL1-AS1Q8N2C9 162 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 SFRP1Q8N474 314 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 C19orf18Q8NEA5 215 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 NPAS2Q99743 824 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF556Q9HAH1 456 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 TRPV5Q9NQA5 729 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 DUX4Q9UBX2 424 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 COPG1Q9Y678 874 aaKnown RBP5.46□□□□□ -1.54
PTPRD-205ENST00000397611 COL11A2P13942 1736 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-205ENST00000397611 SLX4Q8IY92 1834 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 TCRBV3S1A0A5B6 114 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 SYNDIG1LA6NDD5 238 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 J3QRK9 145 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 BMP10O95393 424 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 LTFP02788 710 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PDGFRBP09619 1106 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 NFKB2Q00653 900 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PWP1Q13610 501 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 MYBPC3Q14896 1274 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 DENND5AQ6IQ26 1287 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 TMEM26Q6ZUK4 368 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 KCNMB4Q86W47 210 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 LRRN4Q8WUT4 740 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 LRTOMTQ8WZ04 291 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 FBXL8Q96CD0 374 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PRR11Q96HE9 360 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-205ENST00000397611 UBXN10Q96LJ8 280 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 SIK2Q9H0K1 926 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 CXorf21Q9HAI6 301 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 ZFYVE28Q9HCC9 887 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 RIC8BQ9NVN3 520 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 OSER1Q9NX31 292 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PHF24Q9UPV7 400 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PSAT1Q9Y617 370 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 A0A087X1B8 175 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 LOC100506127A0A0U1RQW1 187 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 ZBTB14O43829 449 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 RHOBTB1O94844 696 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 H6PDO95479 791 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 EPHA3P29320 983 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 KRT6CP48668 564 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 ACVR1Q04771 509 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 NPNTQ6UXI9 565 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 APPL2Q8NEU8 664 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 RHEBL1Q8TAI7 183 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 C1QTNF3Q9BXJ4 246 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 TOR3AQ9H497 397 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 CD274Q9NZQ7 290 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 SPATA7Q9P0W8 599 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 RBPJLQ9UBG7 517 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 PRKAG2Q9UGJ0 569 aa5.46□□□□□ -1.54
PTPRD-205ENST00000397611 MYOCOSA0A1B0GUC4 107 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 MGAT1P26572 445 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 PTGS2P35354 604 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 RAP1GAPP47736 663 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SCNN1GP51170 649 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ATP6V0D1P61421 351 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 FSTL1Q12841 308 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 BNIP3Q12983 259 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SGO1Q5FBB7 561 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 RAB41Q5JT25 222 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ZNF57Q68EA5 555 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ACOT1Q86TX2 421 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 LRRC71Q8N4P6 559 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ANKFN1Q8N957 763 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 SMYD1Q8NB12 490 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 ZHX1-C8orf76Q96EF9 292 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 KLHL32Q96NJ5 620 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 BDH2Q9BUT1 245 aa5.45□□□□□ -1.54
PTPRD-205ENST00000397611 TBC1D13Q9NVG8 400 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms