RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TCRBV5S2A0A599 114 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 ZNF785A8K8V0 405 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 F8WDY8 70 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SLC30A4O14863 429 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CASC3O15234 703 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 EIF3DO15371 548 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CELF2O95319 508 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 AVPP01185 164 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 FAHP16930 419 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 MYF6P23409 242 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SLC6A4P31645 630 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CAMPP49913 170 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 NPEPPSP55786 919 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 TNFRSF17Q02223 184 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 IKQ13123 557 aaPredicted RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SCGB2A2Q13296 93 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CDK5R2Q13319 367 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 LRRC23Q53EV4 343 aaPredicted RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 C19orf54Q5BKX5 351 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 MDH1BQ5I0G3 518 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 KIAA1324Q6UXG2 1013 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 C8orf86Q6ZUL3 223 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SLC46A3Q7Z3Q1 461 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 LDHDQ86WU2 507 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SERPINA12Q8IW75 414 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 TRIM48Q8IWZ4 208 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 MCEMP1Q8IX19 187 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 OR5AN1Q8NGI8 311 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 PIWIL2Q8TC59 973 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 PTPMT1Q8WUK0 201 aaPredicted RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 ARRDC3Q96B67 414 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 ELMOD3Q96FG2 381 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SIKE1Q9BRV8 207 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SLC46A2Q9BY10 475 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 POLR1EQ9GZS1 481 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CLPBQ9H078 707 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 SEMA6CQ9H3T2 930 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 RMND5AQ9H871 391 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 GPR35Q9HC97 309 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 TLR9Q9NR96 1032 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 OLAHQ9NV23 265 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 RLIMQ9NVW2 624 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 HAO2Q9NYQ3 351 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 VPS51Q9UID3 782 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 TRMT6Q9UJA5 497 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CNOT6Q9ULM6 557 aaKnown RBP6.83□□□□□ -1.32
SMCO1-201ENST00000397537 CAPN6Q9Y6Q1 641 aa6.83□□□□□ -1.32
SMCO1-201ENST00000397537 TULP4Q9NRJ4 1543 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 OVOS2A0A0G2JMS6 1433 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 OVOS2A0A0J9YW53 1432 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 NAIPQ13075 1403 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 OVOS2Q6IE36 1432 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 WIPF3A6NGB9 483 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 FAM47DPA6NHR8 397 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 PER2O15055 1255 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ST8SIA3O43173 380 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 NME6O75414 186 aaPredicted RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 IDH1O75874 414 aaKnown RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 POP4O95707 220 aaKnown RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 FGBP02675 491 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 LIPFP07098 398 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 FAM86B2P0C5J1 330 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ANXA8P13928 327 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ITIH1P19827 911 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ACHEP22303 614 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 PTBP1P26599 531 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 APEX1P27695 318 aaKnown RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 GABRB2P47870 512 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ALDH1A3P47895 512 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ADCY7P51828 1080 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ZNF135P52742 658 aaPredicted RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 CYP27A1Q02318 531 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 NFATC3Q12968 1075 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 KLF10Q13118 480 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ERCC6LQ2NKX8 1250 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 TBC1D25Q3MII6 688 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 FASTKD1Q53R41 847 aaKnown RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 C6orf163Q5TEZ5 329 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ANXA8L1Q5VT79 327 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 KRT79Q5XKE5 535 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 TMEM81Q6P7N7 255 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 METAP1DQ6UB28 335 aaPredicted RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 LEKR1Q6ZMV7 388 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 RRM2BQ7LG56 351 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 WDR5BQ86VZ2 330 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 ZNF280BQ86YH2 543 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 FAM9CQ8IZT9 166 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 UXS1Q8NBZ7 420 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 EXOC6Q8TAG9 804 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 CASKIN2Q8WXE0 1202 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 TMIGD2Q96BF3 282 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 MMABQ96EY8 250 aaPredicted RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 C11orf24Q96F05 449 aaPredicted RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 TMEM176AQ96HP8 235 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 TTC25Q96NG3 672 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 MYOCQ99972 504 aa6.82□□□□□ -1.32
SMCO1-201ENST00000397537 WDR83Q9BRX9 315 aaKnown RBP6.82□□□□□ -1.32
SMCO1-201ENST00000397537 TPPP3Q9BW30 176 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms