RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 TDRD6O60522 2096 aaKnown RBP13.78□□□□□ -0.2
SEC13-205ENST00000397101 CPED1A4D0V7 1026 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 POM121BA6NF01 834 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 DRGXA6NNA5 263 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 TMX2-CTNND1H3BSU7 103 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 NTN3O00634 580 aaPredicted RBP13.77□□□□□ -0.21
SEC13-205ENST00000397101 SUV39H1O43463 412 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 AP1G1O43747 822 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 CNTN5O94779 1100 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 ITGB6P18564 788 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 OR1E1P30953 314 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 SERPINB6P35237 376 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 PDX1P52945 283 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 DPYSQ14117 519 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 ALFQ53S48 1182 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 ZNF542PQ5EBM4 170 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 COLEC12Q5KU26 742 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 MANEALQ5VSG8 457 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 SEL1L3Q68CR1 1132 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 NPNTQ6UXI9 565 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 BBS12Q6ZW61 710 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 BZW1Q7L1Q6 419 aaKnown RBP13.77□□□□□ -0.21
SEC13-205ENST00000397101 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 PQLC3Q8N755 202 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 TTC13Q8NBP0 860 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 DENND6BQ8NEG7 585 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 MNS1Q8NEH6 495 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 FAF2Q96CS3 445 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 FEM1CQ96JP0 617 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 IL12RB2Q99665 862 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 C2orf49Q9BVC5 232 aaPredicted RBP13.77□□□□□ -0.21
SEC13-205ENST00000397101 RRAGDQ9NQL2 400 aaPredicted RBP13.77□□□□□ -0.21
SEC13-205ENST00000397101 TTC7AQ9ULT0 858 aaPredicted RBP13.77□□□□□ -0.21
SEC13-205ENST00000397101 MRFAP1Q9Y605 127 aa13.77□□□□□ -0.21
SEC13-205ENST00000397101 IGLV3-10A0A075B6K4 115 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 TCRBV7S2A1N4TA0A589 114 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 H7C0C1 242 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 PAK4O96013 591 aaPredicted RBP13.76□□□□□ -0.21
SEC13-205ENST00000397101 MT-CO1P00395 513 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 RHOCP08134 193 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 JUNDP17535 347 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 ATP5OP48047 213 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 IRAK1P51617 712 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 NEK3P51956 506 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 PFN3P60673 137 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 FGL2Q14314 439 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 TAZQ16635 292 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 C6orf132Q5T0Z8 1188 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 NCBP2-AS2Q69YL0 99 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 ZNF683Q8IZ20 524 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 LZTR1Q8N653 840 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 CEP112Q8N8E3 955 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 RTL3Q8N8U3 475 aaKnown RBP13.76□□□□□ -0.21
SEC13-205ENST00000397101 DCAF4L2Q8NA75 395 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 ATP11CQ8NB49 1132 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 CELF6Q96J87 481 aaKnown RBP13.76□□□□□ -0.21
SEC13-205ENST00000397101 FAM118BQ9BPY3 351 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 HERPUD2Q9BSE4 406 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 CAAP1Q9H8G2 361 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 ETNK2Q9NVF9 386 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 SPASTQ9UBP0 616 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 IL36AQ9UHA7 158 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 KLF15Q9UIH9 416 aa13.76□□□□□ -0.21
SEC13-205ENST00000397101 CTAGE15A4D2H0 777 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 LMO7DNF2Z398 122 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 APOC4-APOC2K7ER74 178 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 DFFAO00273 331 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 FPGTO14772 594 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 PLD2O14939 933 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 BNIP3LO60238 219 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 NOBOXO60393 691 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 MAP3K6O95382 1288 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 APOC2P02655 101 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 CTAGE8P0CG41 777 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 ITGB7P26010 798 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 MAPKAPK2P49137 400 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 NUMBP49757 651 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 OTUD4Q01804 1114 aaKnown RBP13.75□□□□□ -0.21
SEC13-205ENST00000397101 ADCY2Q08462 1091 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 SNX1Q13596 522 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 PDE1CQ14123 709 aaPredicted RBP13.75□□□□□ -0.21
SEC13-205ENST00000397101 SPIDRQ14159 915 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 PTK2BQ14289 1009 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 DEFB133Q30KQ1 61 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 PERM1Q5SV97 790 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 SLC9A4Q6AI14 798 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 USP53Q70EK8 1073 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 SETD3Q86TU7 594 aaPredicted RBP13.75□□□□□ -0.21
SEC13-205ENST00000397101 CTAGE6Q86UF2 777 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 CTAGE4Q8IX94 777 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 SLC35F3Q8IY50 421 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 PLD5Q8N7P1 536 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 NETO2Q8NC67 525 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 CCNYQ8ND76 341 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 LMX1AQ8TE12 382 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 C1orf54Q8WWF1 131 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 MAGOHBQ96A72 148 aaKnown RBP13.75□□□□□ -0.21
SEC13-205ENST00000397101 KLF6Q99612 283 aaPredicted RBP13.75□□□□□ -0.21
SEC13-205ENST00000397101 CCDC3Q9BQI4 270 aa13.75□□□□□ -0.21
SEC13-205ENST00000397101 CARD6Q9BX69 1037 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms