RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TTC7AQ9ULT0 858 aaPredicted RBP10.41□□□□□ -0.74
NEDD8-202ENST00000396828 FZD10Q9ULW2 581 aa10.41□□□□□ -0.74
NEDD8-202ENST00000396828 AP4E1Q9UPM8 1137 aa10.41□□□□□ -0.74
NEDD8-202ENST00000396828 LRP4O75096 1905 aa10.41□□□□□ -0.74
NEDD8-202ENST00000396828 COL12A1Q99715 3063 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 GOLGA6L10A0A0M3HER8 536 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 CXorf51AA0A1B0GTR3 108 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 TEX51A0A1B0GUA7 166 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 RASA4BC9J798 803 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 LMO7DNF2Z398 122 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 H3BM21 787 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 J3KR12 359 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 TK2O00142 265 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 TPP1O14773 563 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 KLK10O43240 276 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 RASA4O43374 803 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 LZTS3O60299 673 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-202ENST00000396828 TM7SF2O76062 418 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 TJP3O95049 919 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 FGGP02679 453 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 PRKCGP05129 697 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 KDELR1P24390 212 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 EPHB2P29323 1055 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 DUSP3P51452 185 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-202ENST00000396828 ZNF135P52742 658 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-202ENST00000396828 CDH6P55285 790 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 ERVPABLB-1P60509 514 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 SKOR1P84550 965 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 IRF4Q15306 451 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 TFDP3Q5H9I0 405 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 TXNRD3NBQ6F5E7 133 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 SPOCD1Q6ZMY3 1216 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 VSIG1Q86XK7 387 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 ZNF354CQ86Y25 554 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 SFTPA2Q8IWL1 248 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 RTL3Q8N8U3 475 aaKnown RBP10.4□□□□□ -0.74
NEDD8-202ENST00000396828 DENND6BQ8NEG7 585 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 RAPGEF5Q92565 580 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 TSACCQ96A04 125 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-202ENST00000396828 MS4A14Q96JA4 679 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 NSMCE3Q96MG7 304 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 SLC46A1Q96NT5 459 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 EPAS1Q99814 870 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 CCDC3Q9BQI4 270 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 OSBPL1AQ9BXW6 950 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 DHX35Q9H5Z1 703 aaKnown RBP10.4□□□□□ -0.74
NEDD8-202ENST00000396828 USP29Q9HBJ7 922 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 HPCAL4Q9UM19 191 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 EFR3BQ9Y2G0 817 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 ANKRD36A6QL64 1941 aa10.4□□□□□ -0.74
NEDD8-202ENST00000396828 CTAGE15A4D2H0 777 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 ZNF487B1APH4 448 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 H3BRJ5 948 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 CREB3O43889 395 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 SLU7O95391 586 aaKnown RBP10.39□□□□□ -0.75
NEDD8-202ENST00000396828 CTAGE8P0CG41 777 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 PLA2G2AP14555 144 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 PTPN7P35236 360 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 ETFBP38117 255 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 ARL4AP40617 200 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 CDKN2BP42772 138 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 RGRP47804 291 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 THOP1P52888 689 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 GEMIN4P57678 1058 aaKnown RBP10.39□□□□□ -0.75
NEDD8-202ENST00000396828 SERINC3Q13530 473 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 TFDP2Q14188 446 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 NR0B2Q15466 257 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 PPP2R5EQ16537 467 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 DPYSL2Q16555 572 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 CA9Q16790 459 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 ALG11Q2TAA5 492 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 WSCD2Q2TBF2 565 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 TMEM52BQ4KMG9 183 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 PPP6R3Q5H9R7 873 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-202ENST00000396828 C6orf132Q5T0Z8 1188 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 FAXCQ5TGI0 409 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 MACC1Q6ZN28 852 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 CYP4V2Q6ZWL3 525 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-202ENST00000396828 B3GNT8Q7Z7M8 397 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 CTAGE6Q86UF2 777 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 SLC13A5Q86YT5 568 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-202ENST00000396828 CTAGE4Q8IX94 777 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 LSMEM2Q8N112 164 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 FAM71BQ8TC56 605 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-202ENST00000396828 CXorf40AQ8TE69 158 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 KCNE4Q8WWG9 221 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 GDAP1L1Q96MZ0 367 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 ZNF670Q9BS34 389 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 CARD6Q9BX69 1037 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 OSBPL8Q9BZF1 889 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 RETREG1Q9H6L5 497 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 PDFQ9HBH1 243 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 GPATCH2LQ9NWQ4 482 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 SIRPGQ9P1W8 387 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 RCOR3Q9P2K3 495 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-202ENST00000396828 SPASTQ9UBP0 616 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 MFHAS1Q9Y4C4 1052 aa10.39□□□□□ -0.75
NEDD8-202ENST00000396828 OR1A2Q9Y585 309 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms