RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 NPWQ8N729 165 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 CCNYQ8ND76 341 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 CCT8L2Q96SF2 557 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 ORAI3Q9BRQ5 295 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 MTG2Q9H4K7 406 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 SGK2Q9HBY8 427 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 PPANQ9NQ55 473 aaKnown RBP17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 TOR4AQ9NXH8 423 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 KIAA1522Q9P206 1035 aaPredicted RBP17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 PSMC3IPQ9P2W1 217 aaPredicted RBP17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 TBK1Q9UHD2 729 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 INTS6Q9UL03 887 aaKnown RBP17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 VANGL2Q9ULK5 521 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 ACACAQ13085 2346 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 TMEM120BA0PK00 339 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 DKK1O94907 266 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 BRAFP15056 766 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 TACR2P21452 398 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 CCNCP24863 283 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 CD27P26842 260 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 CSKP41240 450 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 AP1B1Q10567 949 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 TEAD4Q15561 434 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 PARP6Q2NL67 630 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 HNRNPA1L2Q32P51 320 aaKnown RBP17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 RABGAP1LQ5R372 815 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 FAM182AQ5T1J6 154 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 TTC39BQ5VTQ0 682 aaPredicted RBP17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 AFMIDQ63HM1 303 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 TIGD7Q6NT04 549 aaPredicted RBP17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 FBXL22Q6P050 247 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 ADGRD1Q6QNK2 874 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 C14orf80Q86SX3 495 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 TP53INP2Q8IXH6 220 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 ZNF473Q8WTR7 871 aaKnown RBP17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 FATE1Q969F0 183 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 MRGPRX3Q96LB0 322 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 XAB2Q9HCS7 855 aaKnown RBP17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 SENP1Q9P0U3 644 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 TRHDEQ9UKU6 1024 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 ANKRD6Q9Y2G4 727 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 SNX11Q9Y5W9 270 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 PLXNB3Q9ULL4 1909 aa17.59■□□□□ 0.41
TNFSF13-205ENST00000396545 LOC400499M0QZD8 3231 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 TYW5A2RUC4 315 aaKnown RBP17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 AVILO75366 819 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 C1QAP02745 245 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 ASLP04424 464 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 MLNP12872 115 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 YBEYP58557 167 aaPredicted RBP17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 RAP1GAP2Q684P5 730 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 LAYNQ6UX15 382 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 USP30Q70CQ3 517 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 SRRM1Q8IYB3 904 aaKnown RBP17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 KDM1BQ8NB78 822 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 RPRD1AQ96P16 312 aaPredicted RBP17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 ZNF317Q96PQ6 595 aaPredicted RBP17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 CDC6Q99741 560 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 RABEP2Q9H5N1 569 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 SCML1Q9UN30 329 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 BTBD3Q9Y2F9 522 aa17.58■□□□□ 0.41
TNFSF13-205ENST00000396545 BAHCC1Q9P281 2608 aa17.58■□□□□ 0.4
TNFSF13-205ENST00000396545 TMEM131Q92545 1883 aa17.58■□□□□ 0.4
TNFSF13-205ENST00000396545 PTPRBP23467 1997 aa17.58■□□□□ 0.4
TNFSF13-205ENST00000396545 TCRBV9S1A1TA0A576 114 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 FOXO6A8MYZ6 492 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 RASA4BC9J798 803 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 RASA4O43374 803 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 SIN3BO75182 1162 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 FSBPO95073 299 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 IGHV4-34P06331 123 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 STX2P32856 288 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 CCT5P48643 541 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 SLC18A1P54219 525 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 ST8SIA6P61647 398 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 PPARDQ03181 441 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 MTM1Q13496 603 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 CDH18Q13634 790 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 EFTUD2Q15029 972 aaKnown RBP eCLIP17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 FSCBQ5H9T9 825 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 ZNF567Q8N184 647 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 CARNMT1Q8N4J0 409 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 ATPAF2Q8N5M1 289 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 NETO2Q8NC67 525 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 RHBDD1Q8TEB9 315 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 DCAKDQ8WVC6 231 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 IGSF8Q969P0 613 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 SIGLEC10Q96LC7 697 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 CYTH2Q99418 400 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 PAFAH2Q99487 392 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 PLAC1Q9HBJ0 212 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 TTLL3Q9Y4R7 772 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 ARHGAP42A6NI28 874 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 PRPF4O43172 522 aaKnown RBP eCLIP17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 LUC7L3O95232 432 aaKnown RBP17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 PTPN3P26045 913 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 CDH4P55283 916 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 SARNPP82979 210 aaKnown RBP17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 MPP2Q14168 576 aa17.57■□□□□ 0.4
TNFSF13-205ENST00000396545 SUZ12Q15022 739 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms