RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 DAPK3O43293 454 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 SOCS5O75159 536 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 FGF1P05230 155 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 CSTF2P33240 577 aaKnown RBP eCLIP17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 HSPA9P38646 679 aaKnown RBP17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 LIMK2P53671 638 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 OR1D5P58170 312 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 RAB15P59190 212 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 IL10RBQ08334 325 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 AMZ1Q400G9 498 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 KCTD16Q68DU8 428 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 TMPRSS9Q7Z410 1059 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 PSTKQ8IV42 348 aaKnown RBP17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 LZTR1Q8N653 840 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 IL22RA1Q8N6P7 574 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 ZNF564Q8TBZ8 553 aaPredicted RBP17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 ZNF599Q96NL3 588 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 MCEEQ96PE7 176 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 TEFMQ96QE5 360 aaKnown RBP17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 EFHD1Q9BUP0 239 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 LGR4Q9BXB1 951 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 NLRC4Q9NPP4 1024 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 SPATS2LQ9NUQ6 558 aaKnown RBP17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 TAAR2Q9P1P5 351 aa17.52■□□□□ 0.4
EXOSC3-202ENST00000396521 TCRBV5S1A1TA0A578 114 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 CYSRT1A8MQ03 144 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 B4E171 279 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 PSMD11O00231 422 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 EEF2KO00418 725 aaKnown RBP17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 TEX33O43247 280 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 CCL4P13236 92 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 CD1CP29017 333 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 MAN1A1P33908 653 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 TSPAN7P41732 249 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 CCR10P46092 362 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 GPLD1P80108 840 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 TLE1Q04724 770 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 COLEC12Q5KU26 742 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 PPP1R15BQ5SWA1 713 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 CCL4L1Q8NHW4 92 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 ENOX1Q8TC92 643 aaKnown RBP17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 HTR3CQ8WXA8 447 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 NUS1Q96E22 293 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 COQ10AQ96MF6 247 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 SLC39A8Q9C0K1 460 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 VPS16Q9H269 839 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 TAB2Q9NYJ8 693 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 ANAPC2Q9UJX6 822 aa17.51■□□□□ 0.39
EXOSC3-202ENST00000396521 LRRK2Q5S007 2527 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 ZNF891A8MT65 544 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 ECEL1O95672 775 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 PRKCGP05129 697 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 CEACAM5P06731 702 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 FGF3P11487 239 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 WT1P19544 449 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 RGRP47804 291 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 HCAR3P49019 387 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 SCNN1BP51168 640 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 RPL7AP62424 266 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 NFKB2Q00653 900 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 KCNAB2Q13303 367 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 CLCA4Q14CN2 919 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 RALGPS1Q5JS13 557 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 DCAF12Q5T6F0 453 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 ERMARDQ5T6L9 678 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 NYAP1Q6ZVC0 841 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 NRROSQ86YC3 692 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 ANKRD20A12PQ8NF67 263 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 CELF6Q96J87 481 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 CCDC74BQ96LY2 380 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 NUDT22Q9BRQ3 303 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 FRMD8Q9BZ67 464 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 SEPT11Q9NVA2 429 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 AP4E1Q9UPM8 1137 aa17.5■□□□□ 0.39
EXOSC3-202ENST00000396521 FLNCQ14315 2725 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 COL12A1Q99715 3063 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 HTRA2O43464 458 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 IVLP07476 585 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 CYP2A6P11509 494 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 GM2AP17900 193 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 VIPR1P32241 457 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 UGT1A3P35503 534 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 MAZP56270 477 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 CYP4F2P78329 520 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 RFX8Q6ZV50 586 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 HEATR4Q86WZ0 1026 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 CACNA2D3Q8IZS8 1091 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 CBARPQ8N350 705 aaPredicted RBP17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 BBS5Q8N3I7 341 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 NEK11Q8NG66 645 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 AGPAT1Q99943 283 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 ZPBPQ9BS86 351 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 DHX35Q9H5Z1 703 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 PARVAQ9NVD7 372 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 PDP2Q9P2J9 529 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 B4GALT6Q9UBX8 382 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 PHTF1Q9UMS5 762 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 SLC17A4Q9Y2C5 497 aa17.49■□□□□ 0.39
EXOSC3-202ENST00000396521 SCN8AQ9UQD0 1980 aa17.48■□□□□ 0.39
EXOSC3-202ENST00000396521 RNF8O76064 485 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms