RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 MIPEPQ99797 713 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 BTBD10Q9BSF8 475 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 CCDC106Q9BWC9 280 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 ASAH2Q9NR71 780 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.16□□□□□ -0.468e-6■□□□□ 9.8
ITGB1-202ENST00000396033 ZNF195O14628 629 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 CCL16O15467 120 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 PIGNO95427 931 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 PRSS56P0CW18 603 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 CPA2P48052 419 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 PPIGQ13427 754 aaKnown RBP eCLIP12.16□□□□□ -0.46
ITGB1-202ENST00000396033 TPGS1Q6ZTW0 290 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 CCNYL1Q8N7R7 359 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 TXNDC5Q8NBS9 432 aaKnown RBP12.16□□□□□ -0.46
ITGB1-202ENST00000396033 EMILIN2Q9BXX0 1053 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 POMKQ9H5K3 350 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 COG4Q9H9E3 785 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 PLK2Q9NYY3 685 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 CXXC1Q9P0U4 656 aaPredicted RBP12.16□□□□□ -0.46
ITGB1-202ENST00000396033 ZNF510Q9Y2H8 683 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 RAP2CQ9Y3L5 183 aa12.16□□□□□ -0.46
ITGB1-202ENST00000396033 A6NHS1 94 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 NRG2O14511 850 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 GYG2O15488 501 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 GLUD1P00367 558 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 STC1P52823 247 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 ILF2Q12905 390 aaKnown RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 ARL13AQ5H913 290 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 ATXN7L2Q5T6C5 722 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 PLPP4Q5VZY2 271 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 RINLQ6ZS11 566 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 SLC22A17Q8WUG5 538 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 ANKRD49Q8WVL7 239 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 C2orf49Q9BVC5 232 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 CORO1CQ9ULV4 474 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 PRR5-ARHGAP8B1AHC4 643 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 ANKRD66B4E2M5 251 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 ATP5F1P24539 256 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 SLC8A1P32418 973 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 ARHGAP8P85298 464 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 HTR3DQ70Z44 454 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 APCDD1Q8J025 514 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 PHC3Q8NDX5 983 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 ALG14Q96F25 216 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 SHCBP1LQ9BZQ2 653 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 SMG9Q9H0W8 520 aaKnown RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 POLR3BQ9NW08 1133 aaPredicted RBP12.15□□□□□ -0.46
ITGB1-202ENST00000396033 PRKAG2Q9UGJ0 569 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 TAGLN3Q9UI15 199 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 SORCS3Q9UPU3 1222 aa12.15□□□□□ -0.46
ITGB1-202ENST00000396033 A0A1B0GVG6 124 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 MT-CO1P00395 513 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 RBP1P09455 135 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 FDXRP22570 491 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 ERVFC1P60507 584 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 KDSRQ06136 332 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 PRKAA1Q13131 559 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 GPR158Q5T848 1215 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 ZNF549Q6P9A3 640 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 TM6SF2Q9BZW4 377 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 TLE6Q9H808 572 aa12.15□□□□□ -0.47
ITGB1-202ENST00000396033 NKX1-2Q9UD57 310 aaPredicted RBP12.15□□□□□ -0.47
ITGB1-202ENST00000396033 MTF2Q9Y483 593 aaPredicted RBP12.15□□□□□ -0.47
ITGB1-202ENST00000396033 UBA6A0AVT1 1052 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 NEMP2A6NFY4 417 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 K7ERQ8 282 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 LEFTY2O00292 366 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 HOXB8P17481 243 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 LPOP22079 712 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 CTNNB1P35222 781 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 RPL14P50914 215 aaKnown RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 EPHB1P54762 984 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 FPGSQ05932 587 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 TYSND1Q2T9J0 566 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 MPPE1Q53F39 396 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 PPM1LQ5SGD2 360 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 RETSATQ6NUM9 610 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 CPXM2Q8N436 756 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 TEX9Q8N6V9 391 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 BADQ92934 168 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 UBXN10Q96LJ8 280 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 CADM1Q9BY67 442 aaKnown RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 CYP4F12Q9HCS2 524 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 HIDE1A8MVS5 230 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 IRX1P78414 480 aaPredicted RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 PFKPQ01813 784 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 ACAP2Q15057 778 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 SLC9B1Q4ZJI4 515 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 EPGNQ6UW88 154 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 TMEM207Q6UWW9 146 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 FAM13CQ8NE31 585 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 SH3RF2Q8TEC5 729 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 INTS10Q9NVR2 710 aaKnown RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 NCKIPSDQ9NZQ3 722 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 FNDC3AQ9Y2H6 1198 aaKnown RBP12.14□□□□□ -0.47
ITGB1-202ENST00000396033 ANKRD36A6QL64 1941 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 DENND4CQ5VZ89 1909 aa12.14□□□□□ -0.47
ITGB1-202ENST00000396033 SPECC1L-ADORA2AF8WAN1 911 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms