RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CCDC153Q494R4 210 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PCID2Q5JVF3 399 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 FAXCQ5TGI0 409 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PDPK2PQ6A1A2 396 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 NEPROQ6NW34 567 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TTC23LQ6PF05 361 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 NPNTQ6UXI9 565 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 GSTA5Q7RTV2 222 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TMC8Q8IU68 726 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TMEM151AQ8N4L1 468 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CNTD1Q8N815 330 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 C2CD4AQ8NCU7 369 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 HIPK4Q8NE63 616 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ARRDC2Q8TBH0 407 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 SLC26A7Q8TE54 656 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TRPC4APQ8TEL6 797 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 GIPC3Q8TF64 312 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ALG14Q96F25 216 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ZNF668Q96K58 619 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 CGREF1Q99674 301 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CLSTN3Q9BQT9 956 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 GPR62Q9BZJ7 368 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TKTL2Q9H0I9 626 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 DHX35Q9H5Z1 703 aaKnown RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 ARMC7Q9H6L4 198 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 GLOD4Q9HC38 313 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 NGRNQ9NPE2 291 aaKnown RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 IL23AQ9NPF7 189 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 HACD3Q9P035 362 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 DCDC2Q9UHG0 476 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CDH22Q9UJ99 828 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CROTQ9UKG9 612 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ITM2BQ9Y287 266 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 A0A1W2PQ67 120 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 SLC7A4O43246 635 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 FZD6O60353 706 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 LPXNO60711 386 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 RB1P06400 928 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 GSTT2P0CG29 244 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 GSTT2BP0CG30 244 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 THRAP10827 490 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PRDX6P30041 224 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 STT3AP46977 705 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 HARS2P49590 506 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 RENBPP51606 427 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PITX1P78337 314 aaPredicted RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 PCDH1Q08174 1060 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 CDH17Q12864 832 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 TUBB3Q13509 450 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 IRAK1BP1Q5VVH5 260 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 CES4AQ5XG92 561 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PKN3Q6P5Z2 889 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 SLC2A7Q6PXP3 512 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PAOXQ6QHF9 649 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 RSPO2Q6UXX9 243 aaPredicted RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 TMEM184AQ6ZMB5 413 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 DENND5BQ6ZUT9 1274 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 TRMT1LQ7Z2T5 733 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 KLHDC8AQ8IYD2 350 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 SCAIQ8N9R8 606 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 DBF4BQ8NFT6 615 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PDCD6IPQ8WUM4 868 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 HLA-CQ95604 372 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 TMEM209Q96SK2 561 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 RBBP8Q99708 897 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 LPIN3Q9BQK8 851 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 C1QTNF1Q9BXJ1 281 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 CALN1Q9BXU9 219 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 C11orf49Q9H6J7 331 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 IL21Q9HBE4 155 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 ALG13Q9NP73 1137 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 OBP2AQ9NY56 170 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PCSK1NQ9UHG2 260 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 DNMT3LQ9UJW3 386 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PSMD13Q9UNM6 376 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 FAF1Q9UNN5 650 aaPredicted RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 POMPQ9Y244 141 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 AP4B1Q9Y6B7 739 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 A0A1W2PQH9 124 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 ARHGAP42A6NI28 874 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 AGAP14A8MT82 685 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 EIF3FO00303 357 aaPredicted RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 FOXD2O60548 495 aaPredicted RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 ZMPSTE24O75844 475 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 KRT37O76014 449 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 KRT38O76015 456 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 SORBS2O94875 1100 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 SCGB1D2O95969 90 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 FAM58BPP0C7Q3 252 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 SRGAP2BP0DMP2 458 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 NCAM1P13591 858 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 ZNF12P17014 697 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 LEPRP48357 1165 aaKnown RBP5.38□□□□□ -1.55
VPS41-203ENST00000395969 ENTPD1P49961 510 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 BCAP31P51572 246 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 COPAP53621 1224 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 NUP107P57740 925 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 SLC25A3Q00325 362 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 GK3PQ14409 553 aa5.38□□□□□ -1.55
VPS41-203ENST00000395969 PRPSAP1Q14558 356 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms