RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 A8MU76 341 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 CETN3O15182 167 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 INPP4BO15327 924 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 INSIG1O15503 277 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 KRT86O43790 486 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 RECQL5O94762 991 aaPredicted RBP13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 FMO5P49326 533 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 GEMIN4P57678 1058 aaKnown RBP13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 ILF3Q12906 894 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■■□ 21.4
VCPKMT-201ENST00000395859 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 MANEALQ5VSG8 457 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 C6orf15Q6UXA7 325 aaPredicted RBP13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 RRAGAQ7L523 313 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 ARHGEF19Q8IW93 802 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 DRC7Q8IY82 874 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 GALNT6Q8NCL4 622 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 SNRNP40Q96DI7 357 aaKnown RBP13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 GDAP1L1Q96MZ0 367 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 FRMD8Q9BZ67 464 aaPredicted RBP13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 CARS2Q9HA77 564 aaKnown RBP13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 ACP6Q9NPH0 428 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 PHTF1Q9UMS5 762 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 NEU3Q9UQ49 428 aa13.67□□□□□ -0.22
VCPKMT-201ENST00000395859 A0A1B0GTL3 188 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 PIPSLA2A3N6 862 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 HEATR9A2RTY3 570 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 TMCC1O94876 653 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 ANKRD34CP0C6C1 535 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 CTBSQ01459 385 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 ZRSR2Q15696 482 aaKnown RBP13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 CRB2Q5IJ48 1285 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 SLC30A9Q6PML9 568 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 LEKR1Q6ZMV7 388 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 SLC47A2Q86VL8 602 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 MFRPQ9BY79 579 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 ULBP3Q9BZM4 244 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 WDR26Q9H7D7 661 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 SLAMF7Q9NQ25 335 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 ASF1BQ9NVP2 202 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 RRN3Q9NYV6 651 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 ZNF451Q9Y4E5 1061 aa13.66□□□□□ -0.22
VCPKMT-201ENST00000395859 ANKUB1A6NFN9 424 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 DPM1O60762 260 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 LRCH4O75427 683 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 KATNA1O75449 491 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 PIGNO95427 931 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 ERBB2P04626 1255 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 MYCLP1P12525 358 aaPredicted RBP13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 HOXB4P17483 251 aaPredicted RBP13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 ETFBP38117 255 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 SLC6A3Q01959 620 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 CHAF1BQ13112 559 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 DNASE1L3Q13609 305 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 UGT8Q16880 541 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 SNAP47Q5SQN1 464 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 PNCKQ6P2M8 343 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 LIPIQ6XZB0 460 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 CLEC17AQ6ZS10 378 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 C11orf57Q6ZUT1 292 aaPredicted RBP13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 ZNF761Q86XN6 746 aaPredicted RBP13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 HPS6Q86YV9 775 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 THAP4Q8WY91 577 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 SCARF2Q96GP6 870 aaPredicted RBP13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 ZNF396Q96N95 335 aaPredicted RBP13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 TEX101Q9BY14 249 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 ATP8A1Q9Y2Q0 1164 aa13.65□□□□□ -0.22
VCPKMT-201ENST00000395859 A6NCN8 305 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 KDELR3O43731 214 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 BUB1BO60566 1050 aaPredicted RBP13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 LETM1O95202 739 aaPredicted RBP13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 IGSF6O95976 241 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 ITGA3P26006 1051 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 MAPKAPK2P49137 400 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 ITGA1P56199 1179 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 RAD51Q06609 339 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 CHRNA6Q15825 494 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 INO80DQ53TQ3 878 aaPredicted RBP13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 AFMIDQ63HM1 303 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 SFRP1Q8N474 314 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 NETO2Q8NC67 525 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 OR10G6Q8NH81 332 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 SLC37A2Q8TED4 501 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 RNF31Q96EP0 1072 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 TBCBQ99426 244 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 ING2Q9H160 280 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 MAGEH1Q9H213 219 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 SUV39H2Q9H5I1 410 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 RETREG1Q9H6L5 497 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 LHX3Q9UBR4 397 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 SUFUQ9UMX1 484 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 HPSEQ9Y251 543 aa13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 MN1Q10571 1320 aaPredicted RBP13.64□□□□□ -0.23
VCPKMT-201ENST00000395859 C21orf140B9A014 251 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 PDE2AO00408 941 aaPredicted RBP13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 MED7O43513 233 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 F9P00740 461 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 ADCY8P40145 1251 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 GARSP41250 739 aaKnown RBP13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 GNPDA1P46926 289 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms