RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 MAGEA13PA6NCF6 341 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 TCAF2A6NFQ2 919 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 H3BNX3 289 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 KCNC1P48547 511 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 THOP1P52888 689 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 CDH4P55283 916 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 ZNF678Q5SXM1 525 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 IL31Q6EBC2 164 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 SDCCAG8Q86SQ7 713 aaPredicted RBP11.29□□□□□ -0.6
RAE1-203ENST00000395841 PDSS2Q86YH6 399 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 OR13C4Q8NGS5 318 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 SPDL1Q96EA4 605 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 KLHL4Q9C0H6 718 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 TRPC7Q9HCX4 862 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 SCOCQ9UIL1 159 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 FIS1Q9Y3D6 152 aa11.29□□□□□ -0.6
RAE1-203ENST00000395841 ZFP37Q9Y6Q3 630 aaPredicted RBP11.29□□□□□ -0.6
RAE1-203ENST00000395841 CASQ2O14958 399 aaPredicted RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 SMIM24O75264 130 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 SLC4A1P02730 911 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 ENO3P13929 434 aaPredicted RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 CD1DP15813 335 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 C1QTNF8P60827 252 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 TIAL1Q01085 375 aaKnown RBP eCLIP11.28□□□□□ -0.6
RAE1-203ENST00000395841 SQLEQ14534 574 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 SEMA3AQ14563 771 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 PTPRCAPQ14761 206 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 PRSS55Q6UWB4 352 aaPredicted RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 FAM43BQ6ZT52 329 aaPredicted RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 RPS27LQ71UM5 84 aaKnown RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 PDZD8Q8NEN9 1154 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 OR7D4Q8NG98 312 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 GDPD5Q8WTR4 605 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 PPP2R3CQ969Q6 453 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 PTERQ96BW5 349 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 PSKH2Q96QS6 385 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 UTP6Q9NYH9 597 aaKnown RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 UBA2Q9UBT2 640 aaPredicted RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 PHF24Q9UPV7 400 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 TRAF6Q9Y4K3 522 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 H3BNC9 293 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 UBFD1O14562 309 aaKnown RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 UBDO15205 165 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 CFLARO15519 480 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 KDELR3O43731 214 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 CRTAMO95727 393 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 PIRTP0C851 137 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 STC1P52823 247 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 OXCT1P55809 520 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 HERVK_113P63132 956 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 MAPRE2Q15555 327 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 TYSND1Q2T9J0 566 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 CRIPAKQ8N1N5 446 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 OR52K2Q8NGK3 314 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 SH3RF2Q8TEC5 729 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 BCL7CQ8WUZ0 217 aaPredicted RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 OVCA2Q8WZ82 227 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 CINPQ9BW66 212 aaPredicted RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 ERVK-6Q9BXR3 956 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 MRPL1Q9BYD6 325 aaKnown RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 NACA2Q9H009 215 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 INTS10Q9NVR2 710 aaKnown RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 NLE1Q9NVX2 485 aaPredicted RBP11.28□□□□□ -0.6
RAE1-203ENST00000395841 DLGAP2Q9P1A6 1054 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 PACSIN3Q9UKS6 424 aa11.28□□□□□ -0.6
RAE1-203ENST00000395841 TBKBP1A7MCY6 615 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 KIF1CO43896 1103 aaKnown RBP11.27□□□□□ -0.6
RAE1-203ENST00000395841 PEX1O43933 1283 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 CLDN11O75508 207 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 SUPT7LO94864 414 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 LINGO3P0C6S8 592 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 ZNF37AP17032 561 aaPredicted RBP11.27□□□□□ -0.6
RAE1-203ENST00000395841 XRCC1P18887 633 aaPredicted RBP11.27□□□□□ -0.6
RAE1-203ENST00000395841 ME2P23368 584 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 PMLP29590 882 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 STX5Q13190 355 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 CEACAM7Q14002 265 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 FLOT2Q14254 428 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 TRIM60Q495X7 471 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 UNC50Q53HI1 259 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 LPCAT4Q643R3 524 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 SLC8B1Q6J4K2 584 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 KLHDC10Q6PID8 442 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 CDKN2AIPNLQ96HQ2 116 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 ZNF512Q96ME7 567 aaPredicted RBP11.27□□□□□ -0.6
RAE1-203ENST00000395841 NPAS2Q99743 824 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 AARSD1Q9BTE6 412 aaKnown RBP11.27□□□□□ -0.6
RAE1-203ENST00000395841 SPON2Q9BUD6 331 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 POLR3BQ9NW08 1133 aaPredicted RBP11.27□□□□□ -0.6
RAE1-203ENST00000395841 C6orf203Q9P0P8 240 aaPredicted RBP11.27□□□□□ -0.6
RAE1-203ENST00000395841 PSMD13Q9UNM6 376 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 MTF2Q9Y483 593 aaPredicted RBP11.27□□□□□ -0.6
RAE1-203ENST00000395841 ARIH1Q9Y4X5 557 aaPredicted RBP11.27□□□□□ -0.6
RAE1-203ENST00000395841 ACTL7AQ9Y615 435 aa11.27□□□□□ -0.6
RAE1-203ENST00000395841 MIA3Q5JRA6 1907 aa11.27□□□□□ -0.61
RAE1-203ENST00000395841 ZNF840PA6NDX5 716 aa11.27□□□□□ -0.61
RAE1-203ENST00000395841 ADAM12O43184 909 aa11.27□□□□□ -0.61
RAE1-203ENST00000395841 PEX2P28328 305 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms