RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ATAD1Q8NBU5 361 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 RDH11Q8TC12 318 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 RAD51AP1Q96B01 352 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 ZNF607Q96SK3 696 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 IKZF3Q9UKT9 509 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 PPLO60437 1756 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TRBV23OR9-2A0A075B6M9 112 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 ATG13O75143 517 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 STBD1O95210 358 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 MANFP55145 182 aaKnown RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TAS2R40P59535 323 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TAS2R41P59536 307 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 CYP4F2P78329 520 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 DEF8Q6ZN54 512 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 GPR180Q86V85 440 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TCF25Q9BQ70 676 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 B3GNT5Q9BYG0 378 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 LOC100506127A0A0U1RQW1 187 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 SMIM28A0A1B0GU29 152 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 ASNA1O43681 348 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 SERPINB7O75635 380 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 ZMPSTE24O75844 475 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 UGT2B4P06133 528 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 IGFALSP35858 605 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 SLC5A3P53794 718 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 ARMC3Q5W041 872 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 CAPN13Q6MZZ7 669 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TRIM40Q6P9F5 258 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 LRRC55Q6ZSA7 311 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 Q96MT0 163 aa10.4□□□□□ -0.74
COL4A6-203ENST00000394872 PAIP1Q9H074 479 aaKnown RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 EVLQ9UI08 416 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 ZMYND8Q9ULU4 1186 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 POLR3HQ9Y535 204 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-203ENST00000394872 TMEM131LA2VDJ0 1609 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 RFXANKO14593 260 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 KLRC4O43908 158 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 GMFGO60234 142 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 COX4I1P13073 169 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 SSR2P43308 183 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 ELP6Q0PNE2 266 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 DGCR6Q14129 220 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 CLP1Q92989 425 aaKnown RBP10.4□□□□□ -0.75
COL4A6-203ENST00000394872 HSD17B14Q9BPX1 270 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 C3orf14Q9HBI5 128 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 SNX15Q9NRS6 342 aa10.4□□□□□ -0.75
COL4A6-203ENST00000394872 E9PAM4 449 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 KPNA4O00629 521 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 OR10H3O60404 316 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ALAS2P22557 587 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 RHAGQ02094 409 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ECM1Q16610 540 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 RHBDF2Q6PJF5 856 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 TSHZ1Q6ZSZ6 1077 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 BBS12Q6ZW61 710 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 TMPRSS11BQ86T26 416 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ZNF398Q8TD17 642 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 IPCEF1Q8WWN9 437 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 NDRG1Q92597 394 aaKnown RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 SPAG4Q9NPE6 437 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ZBTB48P10074 688 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ITPKAP23677 461 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 MARCKSL1P49006 195 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 TIMM50Q3ZCQ8 353 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ANKS1BQ7Z6G8 1248 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 NRSN1Q8IZ57 195 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 TEX47Q8TBZ9 253 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ACMSDQ8TDX5 336 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 UPF1Q92900 1129 aaKnown RBP eCLIP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 P2RY11Q96G91 374 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 AIF1LQ9BQI0 150 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 MCMBPQ9BTE3 642 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 CNPPD1Q9BV87 410 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ACE2Q9BYF1 805 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 PCDH18Q9HCL0 1135 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 XPR1Q9UBH6 696 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 FBXO5Q9UKT4 447 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 GMPPBQ9Y5P6 360 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 COLEC10Q9Y6Z7 277 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 H7C0S8 307 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 AZIN1O14977 448 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 DUSP11O75319 330 aaKnown RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 HNRNPLP14866 589 aaKnown RBP eCLIP10.39□□□□□ -0.752e-6■■■■□ 21.2
COL4A6-203ENST00000394872 CLCNKBP51801 687 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 CCNIQ14094 377 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 NR1D2Q14995 579 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 POTEHQ6S545 545 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 TNS4Q8IZW8 715 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 TSEN2Q8NCE0 465 aaKnown RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 BPIFB6Q8NFQ5 453 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 JOSD2Q8TAC2 188 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 ARNTL2Q8WYA1 636 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 MCRS1Q96EZ8 462 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 OR52E6Q96RD3 313 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 LRRC19Q9H756 370 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 GLOD4Q9HC38 313 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 KLF15Q9UIH9 416 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 RPP40O75818 363 aaKnown RBP10.39□□□□□ -0.75
COL4A6-203ENST00000394872 TFPIP10646 304 aa10.39□□□□□ -0.75
COL4A6-203ENST00000394872 PSMD4P55036 377 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms