RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FIG4Q92562 907 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 VPS33AQ96AX1 596 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 TBATAQ96M53 351 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 HAPLN3Q96S86 360 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ACBD6Q9BR61 282 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 CACNA2D2Q9NY47 1150 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 CNOT6Q9ULM6 557 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 FAM149AA5PLN7 773 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 HOXA11P31270 313 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC5A3P53794 718 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 RAD23AP54725 363 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 IL2P60568 153 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 DSC2Q02487 901 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF423Q2M1K9 1284 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 TRIM16LQ309B1 348 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 RBM20Q5T481 1227 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 SCIMPQ6UWF3 145 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ADCK1Q86TW2 530 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 OR4L1Q8NH43 312 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 SEPT8Q92599 483 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ASIC4Q96FT7 647 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 ADGRE3Q9BY15 652 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 UGT2B28Q9BY64 529 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 KCNH4Q9UQ05 1017 aa11.68□□□□□ -0.54
UBE2D3-209ENST00000394804 GPIP06744 558 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 IMPDH1P20839 514 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 DNAJB13P59910 316 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 TIGD2Q4W5G0 525 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 GPR107Q5VW38 600 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 TAPT1Q6NXT6 567 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 CTU1Q7Z7A3 348 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 HM13Q8TCT9 377 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 CENPNQ96H22 339 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 SCN3BQ9NY72 215 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 CACNG4Q9UBN1 327 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 ABT1Q9ULW3 272 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 DNAJC25-GNG10A0A024R161 153 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 C9JVG2 144 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 ASLP04424 464 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC2A4P14672 509 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 PAX3P23760 479 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 HTRA3P83110 453 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 TRAF2Q12933 501 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 PTPRNQ16849 979 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF467Q7Z7K2 595 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 MON1AQ86VX9 555 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 SFRP1Q8N474 314 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 CPSF7Q8N684 471 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 NPWQ8N729 165 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 CANT1Q8WVQ1 401 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.543e-7■■■□□ 18.3
UBE2D3-209ENST00000394804 ADAM2Q99965 735 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 ADI1Q9BV57 179 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 CLPBQ9H078 707 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 MUC13Q9H3R2 512 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 RUBCNLQ9H714 662 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 CRTAC1Q9NQ79 661 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 LIMD1Q9UGP4 676 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 PHIPQ8WWQ0 1821 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 AQP12BA6NM10 295 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 MYO1GB0I1T2 1018 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 H0Y626 953 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 TRIM16O95361 564 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 RHOCP08134 193 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 RHOQP17081 205 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 KPNA1P52294 538 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 PGGT1BP53609 377 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 MAPK10P53779 464 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF792Q3KQV3 632 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 AQP12AQ8IXF9 295 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 ACOX2Q99424 681 aa11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 UBA2Q9UBT2 640 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-209ENST00000394804 A0A1W2PQH9 124 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 EVPLLA8MZ36 301 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 PIP5K1BO14986 540 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 ADCY6O43306 1168 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 RNASEH2AO75792 299 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 AKR1A1P14550 325 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 CLCN2P51788 898 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 SOX4Q06945 474 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 TSTA3Q13630 321 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 GTF2H3Q13889 308 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 IKBKEQ14164 716 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 ZIK1Q3SY52 487 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF280DQ6N043 979 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 AFTPHQ6ULP2 937 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 IL27RAQ6UWB1 636 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 GPRIN3Q6ZVF9 776 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 LRRC8DQ7L1W4 858 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 SPATA19Q7Z5L4 167 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 LGI2Q8N0V4 545 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 C2CD4AQ8NCU7 369 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 C1orf50Q9BV19 199 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 DPY30Q9C005 99 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 H3BSA7 217 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 GRID2O43424 1007 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 KATNA1O75449 491 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC22A3O75751 556 aa11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 RPP40O75818 363 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-209ENST00000394804 GALNT3Q14435 633 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms