RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 DPPA5A6NC42 116 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 NEDD8-MDP1E9PL57 170 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 BUD23O43709 281 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 TYROBPO43914 113 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 KRT38O76015 456 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 FGF19O95750 216 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PENKP01210 267 aaPredicted RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 PRKCGP05129 697 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SERPINF2P08697 491 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 ATXN1LP0C7T5 689 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 CD70P32970 193 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SERPINH1P50454 418 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 CDK18Q07002 472 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 TNK2Q07912 1038 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 LMAN2Q12907 356 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 KPNB1Q14974 876 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 CNGA3Q16281 694 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PRSS36Q5K4E3 855 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 LGSNQ5TDP6 509 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PACS1Q6VY07 963 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 RTL10Q7L3V2 364 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 KCNMB4Q86W47 210 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 CCDC117Q8IWD4 279 aaPredicted RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 BBS5Q8N3I7 341 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 CPXM2Q8N436 756 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 FITM2Q8N6M3 262 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 BANPQ8N9N5 519 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PPHLN1Q8NEY8 458 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 VN1R2Q8NFZ6 395 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 EDARADDQ8WWZ3 215 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SMG7Q92540 1137 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 NCSTNQ92542 709 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 TADA1Q96BN2 335 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 ALG14Q96F25 216 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SMIM14Q96QK8 99 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 NR1H4Q96RI1 486 aaPredicted RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 SLC13A1Q9BZW2 595 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 MMADHCQ9H3L0 296 aaPredicted RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 ARNT2Q9HBZ2 717 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 IARS2Q9NSE4 1012 aaKnown RBP6.98□□□□□ -1.29
RTN4-205ENST00000394609 FGFR1OP2Q9NVK5 253 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 ZDHHC7Q9NXF8 308 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SENP1Q9P0U3 644 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 TXNDC16Q9P2K2 825 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SCOCQ9UIL1 159 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 ZNF180Q9UJW8 692 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 CHKBQ9Y259 395 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 TCAF1Q9Y4C2 921 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 PCDHGC4Q9Y5F7 938 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 WNT6Q9Y6F9 365 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 USH1CQ9Y6N9 552 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 SZT2Q5T011 3432 aa6.98□□□□□ -1.29
RTN4-205ENST00000394609 TRANK1O15050 2925 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 C5orf42Q9H799 3197 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 DOCK4Q8N1I0 1966 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 TTC36A6NLP5 189 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 TCP11X1B4DZS4 312 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 CCL22O00626 93 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 INSIG1O15503 277 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 PRPF4O43172 522 aaKnown RBP eCLIP6.97□□□□□ -1.29
RTN4-205ENST00000394609 SMAD6O43541 496 aaKnown RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 RFPL1O75677 317 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 TOP3BO95985 862 aaKnown RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 CYBBP04839 570 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 ITGB2P05107 769 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 BMP4P12644 408 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 PFKLP17858 780 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 ADRA1DP25100 572 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 ARNTP27540 789 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 VHLP40337 213 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 CLCN2P51788 898 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 IL9RQ01113 521 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 USP4Q13107 963 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 MSLNQ13421 630 aaPredicted RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 RFTN1Q14699 578 aaPredicted RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 PTPRCAPQ14761 206 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 PTPRRQ15256 657 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 MPP7Q5T2T1 576 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 ATXN7L2Q5T6C5 722 aaPredicted RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 TEDDM1Q5T9Z0 273 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 THEMIS2Q5TEJ8 643 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 FYB2Q5VWT5 728 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 OR52E8Q6IFG1 317 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 ZNF783Q6ZMS7 281 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 CDHR3Q6ZTQ4 885 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 SH2D5Q6ZV89 423 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 MARK2Q7KZI7 788 aaKnown RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 ARHGAP22Q7Z5H3 698 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 STRA8Q7Z7C7 330 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 KIRREL3Q8IZU9 778 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 PNPLA1Q8N8W4 532 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 LEMD2Q8NC56 503 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 OR6K2Q8NGY2 324 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 FIBINQ8TAL6 211 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 BLOC1S5Q8TDH9 187 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 TCP10LQ8TDR4 215 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 RHBDD1Q8TEB9 315 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 DENND1AQ8TEH3 1009 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms