RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 MARVELD2Q8N4S9 558 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 UBXN10Q96LJ8 280 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 BTBD9Q96Q07 612 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 CYP2S1Q96SQ9 504 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 MRPL1Q9BYD6 325 aaKnown RBP13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 IKZF3Q9UKT9 509 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 VWA7Q9Y334 891 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 TRAF6Q9Y4K3 522 aa13.51□□□□□ -0.25
GTF2F1-201ENST00000394456 TRIM38O00635 465 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 ENPP3O14638 875 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 CKMT2P17540 419 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 PAX3P23760 479 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 LEPRP48357 1165 aaKnown RBP13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 APLP1P51693 650 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 SH3BP2P78314 561 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 HTRA3P83110 453 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 GRB7Q14451 532 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 HERC3Q15034 1050 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 C11orf91Q3C1V1 193 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 MS4A13Q5J8X5 152 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 BRMS1LQ5PSV4 323 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 HMBOX1Q6NT76 420 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 ZNF683Q8IZ20 524 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 NUP93Q8N1F7 819 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 BLOC1S5Q8TDH9 187 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 TRIM62Q9BVG3 475 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC25A51Q9H1U9 297 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 POLR3BQ9NW08 1133 aaPredicted RBP13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 BTRCQ9Y297 605 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 RNF11Q9Y3C5 154 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 PCDHB7Q9Y5E2 793 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 DOCK4Q8N1I0 1966 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 ZNF839A8K0R7 811 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 SLCO1B7G3V0H7 640 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 TMEM189-UBE2V1I3L0A0 370 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 UBXN8O00124 270 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 FGF10O15520 208 aaPredicted RBP13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 DENRO43583 198 aaKnown RBP13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 ZNF26P17031 533 aaPredicted RBP13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 DNAJB13P59910 316 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 XIAPP98170 497 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 SATB1Q01826 763 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 CAPRIN1Q14444 709 aaKnown RBP13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 CYTH1Q15438 398 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 OR4D1Q15615 310 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC5A9Q2M3M2 681 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 MYLK3Q32MK0 819 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 C6orf10Q5SRN2 563 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 TMEM173Q86WV6 379 aaPredicted RBP13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 MYO1HQ8N1T3 1032 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 CFAP52Q8N1V2 620 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 PRICKLE1Q96MT3 831 aaPredicted RBP13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 CIB1Q99828 191 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 MEAF6Q9HAF1 191 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 VPS45Q9NRW7 570 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 VPS28Q9UK41 221 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 SNX13Q9Y5W8 968 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
GTF2F1-201ENST00000394456 TRPC5OSA6NMA1 111 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 MRASO14807 208 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 TIPRLO75663 272 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 ATXN1LP0C7T5 689 aaKnown RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 PAMP19021 973 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 CES1P23141 567 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC7A2P52569 658 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 NFE2Q16621 373 aaPredicted RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 PLA2G4EQ3MJ16 856 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 AGAP9Q5VTM2 703 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 RSPO2Q6UXX9 243 aaPredicted RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 ARRDC2Q8TBH0 407 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 ZNF296Q8WUU4 475 aaPredicted RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 ZFAND2BQ8WV99 257 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 SCLYQ96I15 445 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 CRISPLD1Q9H336 500 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 ATP13A1Q9HD20 1204 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 PCDHB5Q9Y5E4 795 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 HEATR9A2RTY3 570 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 TRIM24O15164 1050 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 LDB2O43679 373 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 GPC4O75487 556 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 HSPA1AP0DMV8 641 aaKnown RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 HSPA1BP0DMV9 641 aaKnown RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 SLC11A1P49279 550 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 PRAMEP78395 509 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 ZNF33AQ06730 810 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 ZNF678Q5SXM1 525 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 MARC1Q5VT66 337 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 ARMC3Q5W041 872 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 FBXL22Q6P050 247 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 SCIMPQ6UWF3 145 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 BEND5Q7L4P6 421 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 SETD3Q86TU7 594 aaPredicted RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 DIS3LQ8TF46 1054 aaKnown RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 NCSTNQ92542 709 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 ESAMQ96AP7 390 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 CASD1Q96PB1 797 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 PHF12Q96QT6 1004 aa13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 SEPT5Q99719 369 aaPredicted RBP13.49□□□□□ -0.25
GTF2F1-201ENST00000394456 NOL11Q9H8H0 719 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms