RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 SMG9Q9H0W8 520 aaKnown RBP13.38□□□□□ -0.27
SRSF5-201ENST00000394366 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.38□□□□□ -0.27
SRSF5-201ENST00000394366 GGT7Q9UJ14 662 aa13.38□□□□□ -0.27
SRSF5-201ENST00000394366 SLC25A13Q9UJS0 675 aa13.38□□□□□ -0.27
SRSF5-201ENST00000394366 CA14Q9ULX7 337 aa13.38□□□□□ -0.27
SRSF5-201ENST00000394366 VPS9D1Q9Y2B5 631 aa13.38□□□□□ -0.27
SRSF5-201ENST00000394366 FCF1Q9Y324 198 aaKnown RBP13.38□□□□□ -0.27
SRSF5-201ENST00000394366 TECTAO75443 2155 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 A0A087X1B8 175 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 HEPACAM2A8MVW5 462 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 PRLP01236 227 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 PSMC3P17980 439 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 LPOP22079 712 aaPredicted RBP13.37□□□□□ -0.27
SRSF5-201ENST00000394366 GRK2P25098 689 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 GABRB3P28472 473 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 ALDH3A1P30838 453 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 CD70P32970 193 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 ZNF140P52738 457 aaPredicted RBP13.37□□□□□ -0.27
SRSF5-201ENST00000394366 EPHB1P54762 984 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 SNRPD1P62314 119 aaKnown RBP13.37□□□□□ -0.27
SRSF5-201ENST00000394366 PFKPQ01813 784 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 IFT88Q13099 833 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 GRM2Q14416 872 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 TSNAXIP1Q2TAA8 658 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 ARMC12Q5T9G4 340 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 AFTPHQ6ULP2 937 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 VITQ6UXI7 678 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 CMC1Q7Z7K0 106 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 GBP7Q8N8V2 638 aaPredicted RBP13.37□□□□□ -0.27
SRSF5-201ENST00000394366 LMLNQ96KR4 655 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 C7orf26Q96N11 449 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 TRMT61BQ9BVS5 477 aaKnown RBP13.37□□□□□ -0.27
SRSF5-201ENST00000394366 BBS2Q9BXC9 721 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 CEP44Q9C0F1 390 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 C12orf65Q9H3J6 166 aaKnown RBP13.37□□□□□ -0.27
SRSF5-201ENST00000394366 PLK2Q9NYY3 685 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 HS3ST2Q9Y278 367 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 ACOT9Q9Y305 439 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 PCDHGC4Q9Y5F7 938 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 ARL5AQ9Y689 179 aa13.37□□□□□ -0.27
SRSF5-201ENST00000394366 NUP210Q8TEM1 1887 aaPredicted RBP13.37□□□□□ -0.27
SRSF5-201ENST00000394366 FZD6O60353 706 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 H2AFYO75367 372 aaKnown RBP13.36□□□□□ -0.27
SRSF5-201ENST00000394366 PROCP04070 461 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 COL9A1P20849 921 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 BGNP21810 368 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 NUMBP49757 651 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 PRKAA2P54646 552 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 TMPRSS15P98073 1019 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 MPP1Q00013 466 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 BCL2L1Q07817 233 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 TRAF2Q12933 501 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 OTOAQ7RTW8 1153 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 PTAR1Q7Z6K3 402 aaPredicted RBP13.36□□□□□ -0.27
SRSF5-201ENST00000394366 MFSD6LQ8IWD5 586 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 YAF2Q8IY57 180 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 OR4L1Q8NH43 312 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 PPP1R14CQ8TAE6 165 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 MYO19Q96H55 970 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 ELMO2Q96JJ3 720 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 DNAJC1Q96KC8 554 aaKnown RBP13.36□□□□□ -0.27
SRSF5-201ENST00000394366 TUBGCP5Q96RT8 1024 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 TCF12Q99081 682 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 TRIM55Q9BYV6 548 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 KDM4CQ9H3R0 1056 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 ATP13A3Q9H7F0 1226 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 MAGEE1Q9HCI5 957 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 SLCO1B3Q9NPD5 702 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 CATSPERZQ9NTU4 200 aa13.36□□□□□ -0.27
SRSF5-201ENST00000394366 INTS10Q9NVR2 710 aaKnown RBP13.36□□□□□ -0.27
SRSF5-201ENST00000394366 A0A1W2PQ67 120 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 KRBA1A5PL33 1030 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 CCT8L1PA6NM43 557 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 NEDD8-MDP1E9PL57 170 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 STK25O00506 426 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 CD3EAPO15446 510 aaKnown RBP13.35□□□□□ -0.27
SRSF5-201ENST00000394366 PGLSO95336 258 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 PRAMEF12O95522 483 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 GSRP00390 522 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 MT-CO1P00395 513 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 PABPC1P11940 636 aaKnown RBP13.35□□□□□ -0.27
SRSF5-201ENST00000394366 SERPINA4P29622 427 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 HLA-FP30511 346 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 SLC26A3P40879 764 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 RAD51Q06609 339 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 FASTKD1Q53R41 847 aaKnown RBP13.35□□□□□ -0.27
SRSF5-201ENST00000394366 PPM1JQ5JR12 505 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 FAM45BPQ6NSW5 357 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 CGB2Q6NT52 195 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 TMEM25Q86YD3 366 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 PCDH20Q8N6Y1 951 aaKnown RBP13.35□□□□□ -0.27
SRSF5-201ENST00000394366 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.35□□□□□ -0.27
SRSF5-201ENST00000394366 GPATCH11Q8N954 259 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 FLCNQ8NFG4 579 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 OR2AP1Q8NGE2 309 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 TTC8Q8TAM2 541 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 FAM45AQ8TCE6 357 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 PDCD6IPQ8WUM4 868 aaKnown RBP13.35□□□□□ -0.27
SRSF5-201ENST00000394366 RSPRY1Q96DX4 576 aa13.35□□□□□ -0.27
SRSF5-201ENST00000394366 CDKN2AIPNLQ96HQ2 116 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms