RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 ZNF544Q6NX49 715 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 PIGZQ86VD9 579 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 PIK3R3Q92569 461 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 OMDQ99983 421 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 HGH1Q9BTY7 390 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 LRRC3Q9BY71 257 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 FZD8Q9H461 694 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 REEP1Q9H902 201 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 NDFIP2Q9NV92 336 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 EGFL7Q9UHF1 273 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 WBP11Q9Y2W2 641 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 ITGB4P16144 1822 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 EI24O14681 340 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 RGS10O43665 173 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 MSCO60682 206 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 PIM1P11309 404 aaPredicted RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 CHRM3P20309 590 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 RELAQ04206 551 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 DMPKQ09013 629 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 DENND5AQ6IQ26 1287 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 SPESP1Q6UW49 350 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 CHSY3Q70JA7 882 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 KDELC2Q7Z4H8 507 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 ZC3HC1Q86WB0 502 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 DCP1BQ8IZD4 617 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 FIBCD1Q8N539 461 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 METTL6Q8TCB7 284 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 TWIST2Q8WVJ9 160 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 KATNAL1Q9BW62 490 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 REXO4Q9GZR2 422 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 NUAK2Q9H093 628 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 KAT8Q9H7Z6 458 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 EXOSC4Q9NPD3 245 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 SAMD4AQ9UPU9 718 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 ZNF541Q9H0D2 1346 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 FARP2O94887 1054 aaPredicted RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 MT-CO1P00395 513 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 ALDH3A2P51648 485 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 POLR2JP52435 117 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 PLK1P53350 603 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 COPZ1P61923 177 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 CELF3Q5SZQ8 465 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 FAM182BQ5T319 152 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 PTRHD1Q6GMV3 140 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 LUZP2Q86TE4 346 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 OR8H2Q8N162 312 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 OR2T12Q8NG77 320 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 SLC47A1Q96FL8 570 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 PAWRQ96IZ0 340 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 TEKT5Q96M29 485 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 SERPINB11Q96P15 392 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 WWOXQ9NZC7 414 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 KLRG2A4D1S0 409 aaPredicted RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 YDJCA8MPS7 323 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 SLC28A1O00337 649 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 VILLO15195 856 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 ENDOD1O94919 500 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 SERPINF2P08697 491 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 CKMT2P17540 419 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 BNIP3Q12983 259 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 PLEKHG6Q3KR16 790 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 ZIK1Q3SY52 487 aaPredicted RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 PMF1Q6P1K2 205 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 GPRIN3Q6ZVF9 776 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 RIOX2Q8IUF8 465 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 CHCHD4Q8N4Q1 142 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 MTMR14Q8NCE2 650 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 ZNF540Q8NDQ6 660 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 FBXO27Q8NI29 283 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 KBTBD7Q8WVZ9 684 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 MFSD3Q96ES6 412 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 P2RX7Q99572 595 aaKnown RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 NFKBIZQ9BYH8 718 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 RIBC2Q9H4K1 309 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 TRIM45Q9H8W5 580 aaPredicted RBP8.62□□□□□ -1.03
GABRA1-202ENST00000393943 ABCB10Q9NRK6 738 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 CATSPERZQ9NTU4 200 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 FNIP2Q9P278 1114 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 CORO2BQ9UQ03 480 aa8.62□□□□□ -1.03
GABRA1-202ENST00000393943 FUOMA2VDF0 154 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 SLC7A4O43246 635 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 HSD17B1P14061 328 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 ETFBP38117 255 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 MTHFRP42898 656 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 ABCG1P45844 678 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 MAP3K7CLP57077 242 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 RAB39AQ14964 217 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 ATP6AP1Q15904 470 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 MAPKAPK3Q16644 382 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 PFKFB4Q16877 469 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 Q6ZNX1 250 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 CHERPQ8IWX8 916 aaKnown RBP8.61□□□□□ -1.03
GABRA1-202ENST00000393943 BLOC1S5Q8TDH9 187 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 TMCO6Q96DC7 493 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 GLT1D1Q96MS3 346 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 TKTL2Q9H0I9 626 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 PCDHAC1Q9H158 963 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 CHRAC1Q9NRG0 131 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 ADPRHL2Q9NX46 363 aa8.61□□□□□ -1.03
GABRA1-202ENST00000393943 PIM2Q9P1W9 311 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms