RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 HHATLQ9HCP6 504 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 SPATA31A1Q5TZJ5 1347 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 UBOX5O94941 541 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 FGBP02675 491 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 OR1E1P30953 314 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 PSEN1P49768 467 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 PACS2Q86VP3 889 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 ARMC10Q8N2F6 343 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 ZNF563Q8TA94 476 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 CGRRF1Q99675 332 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 NEXMIFQ5QGS0 1516 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 CAP2P40123 477 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 FBXW8Q8N3Y1 598 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 EXOC2Q96KP1 924 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 HOPXQ9BPY8 73 aaPredicted RBP14.75□□□□□ -0.05
CCDC50-201ENST00000392455 TBL1YQ9BQ87 522 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 SETBP1Q9Y6X0 1596 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 LSM1O15116 133 aaKnown RBP14.75□□□□□ -0.05
CCDC50-201ENST00000392455 AMD1P17707 334 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 BOP1Q14137 746 aaKnown RBP14.75□□□□□ -0.05
CCDC50-201ENST00000392455 CDRT15Q96T59 188 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 PDE4DIPQ5VU43 2346 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 A0A0J9YVX5 310 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 TSPAN1O60635 241 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 NAGLUP54802 743 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 PRKG2Q13237 762 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 GRB10Q13322 594 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 FAM131BQ86XD5 332 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 RASAL3Q86YV0 1011 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 OR8H1Q8NGG4 311 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 DNAJB3Q8WWF6 145 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 POLR1EQ9GZS1 481 aaKnown RBP14.75□□□□□ -0.05
CCDC50-201ENST00000392455 CDC42EP4Q9H3Q1 356 aaKnown RBP14.75□□□□□ -0.05
CCDC50-201ENST00000392455 CHD4Q14839 1912 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 CYP2F1P24903 491 aa14.75□□□□□ -0.05
CCDC50-201ENST00000392455 MATN2O00339 956 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 SLC1A2P43004 574 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 CLEC17AQ6ZS10 378 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 KATNAL2Q8IYT4 538 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 CDYL2Q8N8U2 506 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 ELOVL4Q9GZR5 314 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 WASF3Q9UPY6 502 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 FARSAQ9Y285 508 aaKnown RBP14.74□□□□□ -0.05
CCDC50-201ENST00000392455 SH3D21A4FU49 640 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 PCP4L1A6NKN8 68 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 ARP10275 920 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 KELP23276 732 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 SLC9A4Q6AI14 798 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 GIPC3Q8TF64 312 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 ERLEC1Q96DZ1 483 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 TRMOQ9BU70 441 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 RAB26Q9ULW5 256 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 PCDHGC3Q9UN70 934 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 ITGA10O75578 1167 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 CDH13P55290 713 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 BACE1P56817 501 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 AP5B1Q2VPB7 878 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 SNX32Q86XE0 403 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 GIMAP5Q96F15 307 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 MAGEE1Q9HCI5 957 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 RBM22Q9NW64 420 aaKnown RBP eCLIP14.74□□□□□ -0.05
CCDC50-201ENST00000392455 NKIRAS2Q9NYR9 191 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 RBM47A0AV96 593 aaKnown RBP14.74□□□□□ -0.05
CCDC50-201ENST00000392455 BTN3A1O00481 513 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 CTDNEP1O95476 244 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 TKTL1P51854 596 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 LAMTOR4Q0VGL1 99 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 POU6F1Q14863 301 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 FBXL19Q6PCT2 694 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 RD3Q7Z3Z2 195 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 COLGALT1Q8NBJ5 622 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 PHF21BQ96EK2 531 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 TXN2Q99757 166 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 MROH8Q9H579 483 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 STARD7Q9NQZ5 370 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 PCDHGB6Q9Y5F9 930 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 TIE1P35590 1138 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 ABL2P42684 1182 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 TUFMP49411 452 aaKnown RBP14.74□□□□□ -0.05
CCDC50-201ENST00000392455 PTENP60484 403 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 CHSY3Q70JA7 882 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 PIWIL4Q7Z3Z4 852 aaKnown RBP14.74□□□□□ -0.05
CCDC50-201ENST00000392455 C1orf216Q8TAB5 229 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 OMDQ99983 421 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 GORASP1Q9BQQ3 440 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 TRIM64BA6NI03 449 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 CST1P01037 141 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 ALDH2P05091 517 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 SLC10A7Q0GE19 358 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 WDR49Q8IV35 697 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 DAGLBQ8NCG7 672 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 TRPM4Q8TD43 1214 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 NPAS2Q99743 824 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 DHRS12A0PJE2 317 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 TSPAN4O14817 238 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 BUD31P41223 144 aaPredicted RBP14.74□□□□□ -0.05
CCDC50-201ENST00000392455 RPS9P46781 194 aaKnown RBP14.74□□□□□ -0.05
CCDC50-201ENST00000392455 MAPK14Q16539 360 aa14.74□□□□□ -0.05
CCDC50-201ENST00000392455 FAM153CQ494X1 144 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms