RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 PCDH10Q9P2E7 1040 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 CYTH4Q9UIA0 394 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TPRKBQ9Y3C4 175 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 BCAS1O75363 584 aaPredicted RBP17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SIX3O95343 332 aaPredicted RBP17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ITIH1P19827 911 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ALDH1B1P30837 517 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 OR2B6P58173 313 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TXNL4AP83876 142 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SPCS2Q15005 226 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SNAP47Q5SQN1 464 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ACVR1CQ8NER5 493 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 RDH11Q8TC12 318 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 CHPT1Q8WUD6 406 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 KCNS3Q9BQ31 491 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SUCOQ9UBS9 1254 aaKnown RBP17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 FAM8A1Q9UBU6 413 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TCAF2A6NFQ2 919 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ZBTB24O43167 697 aaPredicted RBP17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SOAT2O75908 522 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 STAG3L1P0CL83 205 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 OXTRP30559 389 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 AMER2Q8N7J2 671 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ZNF420Q8TAQ5 688 aaPredicted RBP17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PPP1R13LQ8WUF5 828 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 GBA3Q9H227 469 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 CDH9Q9ULB4 789 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TMX2Q9Y320 296 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TCAF1Q9Y4C2 921 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 GPSM3Q9Y4H4 160 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 GMPPBQ9Y5P6 360 aa17.01■□□□□ 0.31
TRAF3IP1-202ENST00000391993 BCLAF3A2AJT9 711 aaKnown RBP17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 LACTBL1A8MY62 500 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 LBPP18428 481 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 JAG1P78504 1218 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 CDH17Q12864 832 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PPIL2Q13356 520 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 HERC3Q15034 1050 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PPP1R26Q5T8A7 1209 aaPredicted RBP17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PPP4R4Q6NUP7 873 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 NEPROQ6NW34 567 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ELMSAN1Q6PJG2 1045 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 VASH1Q7L8A9 365 aaPredicted RBP17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 STX19Q8N4C7 294 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ATPAF2Q8N5M1 289 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TFAP2CQ92754 450 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 IL12RB2Q99665 862 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ANKRD60Q9BZ19 345 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 KIF13AQ9H1H9 1805 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 AP1G1O43747 822 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 RGS20O76081 388 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PIRTP0C851 137 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 RABGGTBP53611 331 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PLA2G16P53816 162 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 RC3H1Q5TC82 1133 aaKnown RBP17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SCML4Q8N228 414 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SGCDQ92629 289 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PXMP2Q9NR77 195 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 AASDHPPTQ9NRN7 309 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 LZTS3O60299 673 aaPredicted RBP17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 NAT1P18440 290 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 IDUAP35475 653 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ADIGQ0VDE8 80 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PHKG1Q16816 387 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 WDR45BQ5MNZ6 344 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ESRP1Q6NXG1 681 aaKnown RBP17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 KLHL17Q6TDP4 642 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 KIAA0408Q6ZU52 694 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PODNQ7Z5L7 613 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ATL1Q8WXF7 558 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TMBIM1Q969X1 311 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 C19orf60Q96EN9 201 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 YME1L1Q96TA2 773 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 PRDM16Q9HAZ2 1276 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 IMPAD1Q9NX62 359 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 RABL2AQ9UBK7 228 aaPredicted RBP17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 RNF112Q9ULX5 631 aa17■□□□□ 0.31
TRAF3IP1-202ENST00000391993 HMX2A2RU54 273 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TOMM70O94826 608 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 MT-CYBP00156 380 aaPredicted RBP16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TPSB2P20231 275 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ALDH3B2P48448 385 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 HMGCS2P54868 508 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SNX17Q15036 470 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 TPSAB1Q15661 275 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ZCCHC8Q6NZY4 707 aaKnown RBP16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ZNF773Q6PK81 442 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 CYP4V2Q6ZWL3 525 aaPredicted RBP16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SPATC1Q76KD6 591 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 CARM1Q86X55 608 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 HS3ST5Q8IZT8 346 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SH3YL1Q96HL8 342 aaPredicted RBP16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 FCRL3Q96P31 734 aaPredicted RBP16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 CDK5RAP1Q96SZ6 601 aaKnown RBP16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 ACO2Q99798 780 aaKnown RBP16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 C3orf18Q9UK00 162 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 FBXO5Q9UKT4 447 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 SYNPO2Q9UMS6 1093 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 RBP1P09455 135 aa16.99■□□□□ 0.31
TRAF3IP1-202ENST00000391993 CPB1P15086 417 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms