RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 C1orf61Q13536 156 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 HLTFQ14527 1009 aaKnown RBP eCLIP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 NR1D2Q14995 579 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 TCEAL1Q15170 157 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 NFKBIBQ15653 356 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 SLC14A2Q15849 920 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 CNGA3Q16281 694 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 SMTNL2Q2TAL5 461 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 C14orf28Q4W4Y0 310 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 SPECC1LQ69YQ0 1117 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 ADAMTSL4Q6UY14 1074 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 ARHGAP36Q6ZRI8 547 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 ZNF438Q7Z4V0 828 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 TAF8Q7Z7C8 310 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 AVL9Q8NBF6 648 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 KCTD6Q8NC69 237 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 FAM46DQ8NEK8 389 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 ZNF564Q8TBZ8 553 aaPredicted RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 GPBAR1Q8TDU6 330 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 KCNE4Q8WWG9 221 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 OR1E3Q8WZA6 343 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 TSACCQ96A04 125 aaPredicted RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 HDAC11Q96DB2 347 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 NUS1Q96E22 293 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 SCARF2Q96GP6 870 aaPredicted RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 ZNF830Q96NB3 372 aaPredicted RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 FCRL3Q96P31 734 aaPredicted RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 GFM1Q96RP9 751 aaKnown RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 SRPK1Q96SB4 655 aaKnown RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 DNAJC7Q99615 494 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 FRMD8Q9BZ67 464 aaPredicted RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 XPO4Q9C0E2 1151 aaKnown RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 TCEAL2Q9H3H9 227 aaPredicted RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 FGF22Q9HCT0 170 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 RAD18Q9NS91 495 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 AKAP7Q9P0M2 348 aaPredicted RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 CTTNBP2NLQ9P2B4 639 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 INTUQ9ULD6 942 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 PNMA8BQ9ULN7 279 aaPredicted RBP7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 SLC17A4Q9Y2C5 497 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 COQ6Q9Y2Z9 468 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 PCDHB1Q9Y5F3 818 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 PCDHGC4Q9Y5F7 938 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 FRYQ5TBA9 3013 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 PKD1L2Q7Z442 2459 aa7.05□□□□□ -1.28
RNU1-56P-201ENST00000391303 NUMA1Q14980 2115 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 CHD6Q8TD26 2715 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 A0A0J9YYE9 177 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 TMEM202A6NGA9 273 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 HGSO14964 777 aaPredicted RBP7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 NVLO15381 856 aaKnown RBP7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 NOBOXO60393 691 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 MTA2O94776 668 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 TRBC1P01850 177 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 GM2AP17900 193 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 ITPKBP27987 946 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 CASP14P31944 242 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 SLC1A1P43005 524 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 INHBCP55103 352 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 CDK3Q00526 305 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 ZFP36L1Q07352 338 aaKnown RBP7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 TRAF2Q12933 501 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 TRA2AQ13595 282 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 DPYSL3Q14195 570 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 ASTE1Q2TB18 679 aaPredicted RBP7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 ANKRD20A8PQ5CZ79 823 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 PERM1Q5SV97 790 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 NCBP2-AS2Q69YL0 99 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 BZW1Q7L1Q6 419 aaKnown RBP7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 RD3Q7Z3Z2 195 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 TECPR1Q7Z6L1 1165 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 HEATR4Q86WZ0 1026 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 CCNJLQ8IV13 435 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 RHOT2Q8IXI1 618 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 PGBD5Q8N414 524 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 KYQ8NBH2 561 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 NETO2Q8NC67 525 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 PLA2G15Q8NCC3 412 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 PIH1D2Q8WWB5 315 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 CCDC74AQ96AQ1 378 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 PDXPQ96GD0 296 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 ATXN7L3BQ96GX2 97 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 PRR11Q96HE9 360 aaPredicted RBP7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 CMKLR1Q99788 373 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 SEMA3CQ99985 751 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 TDRD1Q9BXT4 1180 aaKnown RBP7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 ADGRE3Q9BY15 652 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 LRRN3Q9H3W5 708 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 DEF6Q9H4E7 631 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 RMI1Q9H9A7 625 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 ETNK2Q9NVF9 386 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 IFNKQ9P0W0 207 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 VPS18Q9P253 973 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 GULP1Q9UBP9 304 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 SATB2Q9UPW6 733 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 RAI2Q9Y5P3 530 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 ZFHX4Q86UP3 3567 aa7.04□□□□□ -1.28
RNU1-56P-201ENST00000391303 A0A1W2PQM1 296 aa7.03□□□□□ -1.28
RNU1-56P-201ENST00000391303 NPIPB15A6NHN6 443 aaPredicted RBP7.03□□□□□ -1.28
RNU1-56P-201ENST00000391303 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms