RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 PINLYPA6NC86 204 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 ASB14A6NK59 587 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 CHL1O00533 1208 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 PER2O15055 1255 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 PHF1O43189 567 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 SYNGR3O43761 229 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 TMCC1O94876 653 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 TSHBP01222 138 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 AGXTP21549 392 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 MMP8P22894 467 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 EDNRBP24530 442 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 GDF1P27539 372 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 KIR3DL2P43630 455 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 PSMD8P48556 350 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 PPOXP50336 477 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 EFNA3P52797 238 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 KRTAP12-1P59990 96 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 MTAPQ13126 283 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 HNRNPDQ14103 355 aaKnown RBP-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 C16orf72Q14CZ0 275 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 PTPN21Q16825 1174 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 RNLSQ5VYX0 342 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 TRNP1Q6NT89 227 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 ERAP2Q6P179 960 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 ZNF841Q6ZN19 808 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 KRBA2Q6ZNG9 492 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 ZC3HC1Q86WB0 502 aaKnown RBP-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 CALHM3Q86XJ0 350 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 DENND6AQ8IWF6 608 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 ZDHHC23Q8IYP9 409 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 MPP5Q8N3R9 675 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 SRFBP1Q8NEF9 429 aaKnown RBP-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 ADAMTS16Q8TE57 1224 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 GLMPQ8WWB7 406 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 MSTO1Q9BUK6 570 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 NPFFR1Q9GZQ6 430 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 ZCWPW1Q9H0M4 648 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 FZD8Q9H461 694 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 C1orf115Q9H7X2 142 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 PLEKHA3Q9HB20 300 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 XPNPEP3Q9NQH7 507 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 TMEM30AQ9NV96 361 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 TSPAN16Q9UKR8 245 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 PADI1Q9ULC6 663 aa-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 FLGP20930 4061 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-540P-201ENST00000384622 IGKV3D-11A0A0A0MRZ8 115 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 A0A1W2PQM1 296 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 A8MZ25 164 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 B9A039 149 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 TNPO2O14787 897 aaKnown RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 GALR3O60755 368 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 LRCH4O75427 683 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 TRMUO75648 421 aaKnown RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 PIAS2O75928 621 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 NADKO95544 446 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 MYBP10242 640 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 PNMTP11086 282 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 NR2C1P13056 603 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 CD34P28906 385 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 KIR2DS4P43632 304 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 KLK7P49862 253 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 EEF1A1P68104 462 aaKnown RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 PKP1Q13835 747 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 LY6DQ14210 128 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 E2F5Q15329 346 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 CNN3Q15417 329 aaKnown RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 KCTD19Q17RG1 926 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 ARL13AQ5H913 290 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 ATAD3CQ5T2N8 411 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 EEF1A1P5Q5VTE0 462 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 Q5W150 140 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 LMBRD2Q68DH5 695 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 ACSM6Q6P461 480 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 EID3Q8N140 333 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 EXD3Q8N9H8 876 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 EXD1Q8NHP7 514 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 CEP70Q8NHQ1 597 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 SLCO2A1Q92959 643 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 ARSGQ96EG1 525 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 PRICKLE1Q96MT3 831 aaPredicted RBP-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 PPP1R9BQ96SB3 815 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 SIX2Q9NPC8 291 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 ERAP1Q9NZ08 941 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 C1RLQ9NZP8 487 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 GTF3C4Q9UKN8 822 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 ACAD8Q9UKU7 415 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 NAALAD2Q9Y3Q0 740 aa-0.7□□□□□ -2.52
RNU6-540P-201ENST00000384622 CELSR2Q9HCU4 2923 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 DNAH7Q8WXX0 4024 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 ZDBF2Q9HCK1 2354 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 IGHV4-4A0A075B6R2 117 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 SHISA9B4DS77 424 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 E7ENQ6 273 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 SOCS6O14544 535 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 RRP9O43818 475 aaKnown RBP-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 NXPH2O95156 264 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 NR3C1P04150 777 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 TYRP14679 529 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 ITGA3P26006 1051 aa-0.71□□□□□ -2.52
RNU6-540P-201ENST00000384622 CHRNA3P32297 505 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms