RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 WASP42768 502 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 POLR2LP62875 67 aaKnown RBP26.84■■□□□ 1.89
MSX1-201ENST00000382723 BRAT1Q6PJG6 821 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 OR8D1Q8WZ84 308 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 LRIG1Q96JA1 1093 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 MARCH4Q9P2E8 410 aaPredicted RBP26.84■■□□□ 1.89
MSX1-201ENST00000382723 ADAM21Q9UKJ8 722 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 FBXO5Q9UKT4 447 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 A0A1W2PQ67 120 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 AHSGP02765 367 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 ZNF805Q5CZA5 627 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 GPR153Q6NV75 609 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 LDB1Q86U70 411 aaPredicted RBP26.84■■□□□ 1.89
MSX1-201ENST00000382723 C2CD4AQ8NCU7 369 aaPredicted RBP26.84■■□□□ 1.89
MSX1-201ENST00000382723 FKBPLQ9UIM3 349 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 SARDHQ9UL12 918 aa26.84■■□□□ 1.89
MSX1-201ENST00000382723 MUC22E2RYF6 1773 aaPredicted RBP26.83■■□□□ 1.89
MSX1-201ENST00000382723 TMEM120BA0PK00 339 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 K7EQS6 105 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 KPNA3O00505 521 aaPredicted RBP26.83■■□□□ 1.89
MSX1-201ENST00000382723 PYGBP11216 843 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 GABRB3P28472 473 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 HMGCLP35914 325 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 LIMK2P53671 638 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 CSE1LP55060 971 aaKnown RBP26.83■■□□□ 1.89
MSX1-201ENST00000382723 CDKN3Q16667 212 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 PTCRAQ6ISU1 281 aaPredicted RBP26.83■■□□□ 1.89
MSX1-201ENST00000382723 CRTC1Q6UUV9 634 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 CHPFQ8IZ52 775 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 ZNF513Q8N8E2 541 aaPredicted RBP26.83■■□□□ 1.89
MSX1-201ENST00000382723 OR4L1Q8NH43 312 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 GABPB2Q8TAK5 448 aaPredicted RBP26.83■■□□□ 1.89
MSX1-201ENST00000382723 EZH1Q92800 747 aaPredicted RBP26.83■■□□□ 1.89
MSX1-201ENST00000382723 SRPK1Q96SB4 655 aaKnown RBP26.83■■□□□ 1.89
MSX1-201ENST00000382723 FBXO6Q9NRD1 293 aaPredicted RBP26.83■■□□□ 1.89
MSX1-201ENST00000382723 IL17CQ9P0M4 197 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 PPIL1Q9Y3C6 166 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 STARD13Q9Y3M8 1113 aa26.83■■□□□ 1.89
MSX1-201ENST00000382723 NARSO43776 548 aaKnown RBP26.82■■□□□ 1.88
MSX1-201ENST00000382723 TIE1P35590 1138 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 TNFRSF4P43489 277 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 ELAVL3Q14576 367 aaKnown RBP26.82■■□□□ 1.88
MSX1-201ENST00000382723 PON2Q15165 354 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 UGP2Q16851 508 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 LEXMQ3ZCV2 418 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 FSTL4Q6MZW2 842 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 TPRG1Q6ZUI0 275 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 SUGP1Q8IWZ8 645 aaKnown RBP26.82■■□□□ 1.88
MSX1-201ENST00000382723 TRPV5Q9NQA5 729 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 CATSPERZQ9NTU4 200 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 MTO1Q9Y2Z2 717 aaKnown RBP26.82■■□□□ 1.88
MSX1-201ENST00000382723 STON1Q9Y6Q2 735 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 CD3EAPO15446 510 aaKnown RBP26.82■■□□□ 1.88
MSX1-201ENST00000382723 RFPL1O75677 317 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 PRNPP04156 253 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 PRSS56P0CW18 603 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 HADHAP40939 763 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 TTC19Q6DKK2 380 aaPredicted RBP26.82■■□□□ 1.88
MSX1-201ENST00000382723 CILP2Q8IUL8 1156 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 ANKRD42Q8N9B4 389 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 SPOCK2Q92563 424 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 VPS39Q96JC1 886 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 MCCC1Q96RQ3 725 aaPredicted RBP26.82■■□□□ 1.88
MSX1-201ENST00000382723 B4GALT6Q9UBX8 382 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 SUN2Q9UH99 717 aa26.82■■□□□ 1.88
MSX1-201ENST00000382723 C16orf96A6NNT2 1141 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 HAUS5O94927 633 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 TIMP2P16035 220 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 METAP1P53582 386 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 IER5LQ5T953 404 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 LRRC66Q68CR7 880 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 AFTPHQ6ULP2 937 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 TTC7BQ86TV6 843 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 ZC3HC1Q86WB0 502 aaKnown RBP26.81■■□□□ 1.88
MSX1-201ENST00000382723 RALGPS2Q86X27 583 aaPredicted RBP26.81■■□□□ 1.88
MSX1-201ENST00000382723 DCLK2Q8N568 766 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 LYSMD1Q96S90 227 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 FAM129BQ96TA1 746 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 MCMBPQ9BTE3 642 aa26.81■■□□□ 1.88
MSX1-201ENST00000382723 HNRNPLP14866 589 aaKnown RBP eCLIP26.8■■□□□ 1.88
MSX1-201ENST00000382723 XPAP23025 273 aaPredicted RBP26.8■■□□□ 1.88
MSX1-201ENST00000382723 PSMA3P25788 255 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 MC4RP32245 332 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 MPP2Q14168 576 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 ZNF789Q5FWF6 425 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 PIP4K2CQ8TBX8 421 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 MGARPQ8TDB4 240 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 DNASE1L2Q92874 299 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 RHOJQ9H4E5 214 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 CNOT10Q9H9A5 744 aaKnown RBP26.8■■□□□ 1.88
MSX1-201ENST00000382723 PRSS16Q9NQE7 514 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 PPM1HQ9ULR3 514 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 TSPAN11A1L157 253 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 GOLGA8CPA6NN73 597 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 UPK3BL1B0FP48 263 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 UPK3BL2E5RIL1 263 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 TPP1O14773 563 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 EGFP01133 1207 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 IL1BP01584 269 aa26.8■■□□□ 1.88
MSX1-201ENST00000382723 ALDOAP04075 364 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms