RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 MYO19Q96H55 970 aa17.28■□□□□ 0.36
RPAIN-203ENST00000381209 AARSD1Q9BTE6 412 aaKnown RBP17.28■□□□□ 0.36
RPAIN-203ENST00000381209 LRMDAQ9H2I8 198 aa17.28■□□□□ 0.36
RPAIN-203ENST00000381209 TDP1Q9NUW8 608 aa17.28■□□□□ 0.36
RPAIN-203ENST00000381209 ZDHHC7Q9NXF8 308 aa17.28■□□□□ 0.36
RPAIN-203ENST00000381209 PLK2Q9NYY3 685 aa17.28■□□□□ 0.36
RPAIN-203ENST00000381209 INTS6Q9UL03 887 aaKnown RBP17.28■□□□□ 0.36
RPAIN-203ENST00000381209 CCL26Q9Y258 94 aa17.28■□□□□ 0.36
RPAIN-203ENST00000381209 NUMBLQ9Y6R0 609 aa17.28■□□□□ 0.36
RPAIN-203ENST00000381209 PFDN6O15212 129 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 GRM6O15303 877 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 STX7O15400 261 aaKnown RBP17.27■□□□□ 0.36
RPAIN-203ENST00000381209 HTRA2O43464 458 aaPredicted RBP17.27■□□□□ 0.36
RPAIN-203ENST00000381209 SMAD6O43541 496 aaKnown RBP17.27■□□□□ 0.36
RPAIN-203ENST00000381209 CSPG5O95196 566 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 IGSF6O95976 241 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 ATP5F1P24539 256 aaPredicted RBP17.27■□□□□ 0.36
RPAIN-203ENST00000381209 TARSP26639 723 aaKnown RBP17.27■□□□□ 0.36
RPAIN-203ENST00000381209 SERPINB5P36952 375 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 EPHB1P54762 984 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 CDKN2DP55273 166 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 CSHL1Q14406 222 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 PITRM1Q5JRX3 1037 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 PRSS36Q5K4E3 855 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 ZNF549Q6P9A3 640 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 PIH1D2Q8WWB5 315 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 SAMD11Q96NU1 681 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 TMEM237Q96Q45 408 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 MCOLN1Q9GZU1 580 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 PNPOQ9NVS9 261 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 TBC1D14Q9P2M4 693 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 LNPEPQ9UIQ6 1025 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 HAO1Q9UJM8 370 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 SORCS3Q9UPU3 1222 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 CRYL1Q9Y2S2 319 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 PCDHB9Q9Y5E1 797 aa17.27■□□□□ 0.36
RPAIN-203ENST00000381209 KIAA0100Q14667 2235 aaKnown RBP17.27■□□□□ 0.35
RPAIN-203ENST00000381209 ZNF197O14709 1029 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 CCDC166P0CW27 439 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 EPCAMP16422 314 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 SYN1P17600 705 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 PFKPQ01813 784 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 BCL2L1Q07817 233 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 RCN2Q14257 317 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 ALYREFQ86V81 257 aaKnown RBP17.26■□□□□ 0.35
RPAIN-203ENST00000381209 EFHBQ8N7U6 833 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 ISG20Q96AZ6 181 aaKnown RBP17.26■□□□□ 0.35
RPAIN-203ENST00000381209 NSL1Q96IY1 281 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 TM6SF2Q9BZW4 377 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 ILKAPQ9H0C8 392 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-203ENST00000381209 CDH19Q9H159 772 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 POLR3BQ9NW08 1133 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-203ENST00000381209 APOBEC2Q9Y235 224 aaKnown RBP17.26■□□□□ 0.35
RPAIN-203ENST00000381209 RAP2CQ9Y3L5 183 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 ZNF711Q9Y462 761 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 ZNF195O14628 629 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 NPHS1O60500 1241 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 NDUFS3O75489 264 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 CBX6O95503 412 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 SERPINA6P08185 405 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 USP4Q13107 963 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 DMC1Q14565 340 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 TBCCQ15814 346 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 ZNF77Q15935 545 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 SLC5A9Q2M3M2 681 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 AARS2Q5JTZ9 985 aaKnown RBP17.26■□□□□ 0.35
RPAIN-203ENST00000381209 ELMSAN1Q6PJG2 1045 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 SPATA6LQ8N4H0 392 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 RIN3Q8TB24 985 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 STON2Q8WXE9 905 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 LPGAT1Q92604 370 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 OTUB2Q96DC9 234 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 RILPQ96NA2 401 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 LBHD1Q9BQE6 289 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-203ENST00000381209 NMUR2Q9GZQ4 415 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 ATP13A3Q9H7F0 1226 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 IL17CQ9P0M4 197 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 EVLQ9UI08 416 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-203ENST00000381209 HS3ST2Q9Y278 367 aa17.26■□□□□ 0.35
RPAIN-203ENST00000381209 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-203ENST00000381209 MYLKQ15746 1914 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 ZNF821O75541 412 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-203ENST00000381209 HLA-FP30511 346 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 MC4RP32245 332 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 HMGCLP35914 325 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 TTPAP49638 278 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 NAGLUP54802 743 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 KCNJ2P63252 427 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 TIAL1Q01085 375 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■■■■□ 23
RPAIN-203ENST00000381209 PRKAA1Q13131 559 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 TUBB3Q13509 450 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 TTC31Q49AM3 519 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-203ENST00000381209 FBXW10Q5XX13 1052 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 TMEM207Q6UWW9 146 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 PIWIL4Q7Z3Z4 852 aaKnown RBP17.25■□□□□ 0.35
RPAIN-203ENST00000381209 TMEM25Q86YD3 366 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 CAMK1DQ8IU85 385 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 PNPLA1Q8N8W4 532 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 OR2AP1Q8NGE2 309 aa17.25■□□□□ 0.35
RPAIN-203ENST00000381209 ANKRD49Q8WVL7 239 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms