RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PIRO00625 290 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 UBDO15205 165 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 TADA2AO75478 443 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 DAB1O75553 588 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 DARSP14868 501 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 TPTEP56180 551 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 DAOAP59103 153 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 RAB10P61026 200 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 ADAM17P78536 824 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 DNASE1L3Q13609 305 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 ZBTB6Q15916 424 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 PIGGQ5H8A4 983 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 NAPEPLDQ6IQ20 393 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 ZFP1Q6P2D0 407 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 TTC33Q6PID6 262 aaPredicted RBP12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 MAMDC4Q6UXC1 1216 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 ZMIZ2Q8NF64 920 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 RP9Q8TA86 221 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 SPATA17Q96L03 361 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 TEKT5Q96M29 485 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 KCNA7Q96RP8 456 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 RHOJQ9H4E5 214 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 CASS4Q9NQ75 786 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 FBXO5Q9UKT4 447 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 AP4S1Q9Y587 144 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 PRORSD1PA6NEY8 169 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 ESRRBO95718 433 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 CD4P01730 458 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 GJA5P36382 358 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 TUFMP49411 452 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 MLLT10P55197 1068 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 RAB39AQ14964 217 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 SV2CQ496J9 727 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 GPR158Q5T848 1215 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 IL22Q9GZX6 179 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 OSBPL2Q9H1P3 480 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 ADAMTS10Q9H324 1103 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 FAM96AQ9H5X1 160 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 POLR1BQ9H9Y6 1135 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 PCDH12Q9NPG4 1184 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 MIOSQ9NXC5 875 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 GNPTGQ9UJJ9 305 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 A0A0U1RQS6 177 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 PDHXO00330 501 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 SCAMP3O14828 347 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 BMP10O95393 424 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 PRSS56P0CW18 603 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 MYL4P12829 197 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 ARPP19P56211 112 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 KCNC4Q03721 635 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 MOGQ16653 247 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 TSTD2Q5T7W7 516 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 HERC6Q8IVU3 1022 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 OFCC1Q8IZS5 231 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 KDM1BQ8NB78 822 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 ANKRD49Q8WVL7 239 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 CANT1Q8WVQ1 401 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 CCDC138Q96M89 665 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 CEP295NLQ96MC4 621 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 OLFM1Q99784 485 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 TBL1YQ9BQ87 522 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 OSBPL11Q9BXB4 747 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 FBXW11Q9UKB1 542 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 SLC8A2Q9UPR5 921 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 SLC27A5Q9Y2P5 690 aa12.49□□□□□ -0.41
PRPF40B-202ENST00000380281 RNF103-CHMP3A0A140T963 221 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 SDHDO14521 159 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 MYO1DO94832 1006 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 MAP4P27816 1152 aaKnown RBP12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 YAP1P46937 504 aaKnown RBP12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 KCNC1P48547 511 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 PAFAH1B3Q15102 231 aaKnown RBP12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 RPS6KA2Q15349 733 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 VPS26BQ4G0F5 336 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 PPP2R2DQ66LE6 453 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 ZBTB49Q6ZSB9 765 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 CIR1Q86X95 450 aaPredicted RBP12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 NUDT8Q8WV74 236 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 CYGBQ8WWM9 190 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 ZNF597Q96LX8 424 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 SLC39A8Q9C0K1 460 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 MROH8Q9H579 483 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 CDH7Q9ULB5 785 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 A0A087WXM4 84 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 NOTOA8MTQ0 251 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 PTGESO14684 152 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 MRASO14807 208 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 GUCY1B2O75343 617 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 GPR32O75388 356 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 GMNNO75496 209 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 CABYRO75952 493 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 ATP5BP06576 529 aaKnown RBP12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 NCK1P16333 377 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 TUBA4AP68366 448 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 DSG4Q86SJ6 1040 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 MIB1Q86YT6 1006 aa12.48□□□□□ -0.41
PRPF40B-202ENST00000380281 SPPL2CQ8IUH8 684 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms