RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 EIF3CLB5ME19 914 aaKnown RBP23.13■■□□□ 1.29
U2AF1-202ENST00000380276 C9orf172C9J069 976 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 PRPSAP2O60256 369 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 CPP00450 1065 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 HOXC4P09017 264 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-202ENST00000380276 MYCLP1P12525 358 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-202ENST00000380276 CCNB1P14635 433 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 GM2AP17900 193 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 TRIM23P36406 574 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 GNPDA1P46926 289 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 RENBPP51606 427 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 AP1S1P61966 158 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 C16orf72Q14CZ0 275 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 HEATR4Q86WZ0 1026 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 NPWQ8N729 165 aa23.13■■□□□ 1.29
U2AF1-202ENST00000380276 EIF3CQ99613 913 aaKnown RBP23.13■■□□□ 1.29
U2AF1-202ENST00000380276 SPATS2LQ9NUQ6 558 aaKnown RBP23.13■■□□□ 1.29
U2AF1-202ENST00000380276 UNC13CQ8NB66 2214 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 ZW10O43264 779 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 CPNE6O95741 557 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 ITGB2P05107 769 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 CYP4F2P78329 520 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 B4GALNT1Q00973 533 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 MYL5Q02045 173 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 NSUN2Q08J23 767 aaKnown RBP eCLIP23.12■■□□□ 1.29
U2AF1-202ENST00000380276 MAMLD1Q13495 774 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 TMCO4Q5TGY1 634 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 SLC30A9Q6PML9 568 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 SASS6Q6UVJ0 657 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 RCBTB1Q8NDN9 531 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 PCDHGC4Q9Y5F7 938 aa23.12■■□□□ 1.29
U2AF1-202ENST00000380276 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.11■■□□□ 1.29
U2AF1-202ENST00000380276 A0A1W2PQC6 194 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 TRAFD1O14545 582 aaPredicted RBP23.11■■□□□ 1.29
U2AF1-202ENST00000380276 CCL4P13236 92 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 AK4P27144 223 aaPredicted RBP23.11■■□□□ 1.29
U2AF1-202ENST00000380276 VIPR1P32241 457 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 CNGA3Q16281 694 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 RAET1GQ6H3X3 334 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 PPP1R2P3Q6NXS1 205 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 XKR5Q6UX68 686 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 COQ10AQ96MF6 247 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 ERGIC2Q96RQ1 377 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 NUDT22Q9BRQ3 303 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 TAAR2Q9P1P5 351 aa23.11■■□□□ 1.29
U2AF1-202ENST00000380276 ARHGAP6O43182 974 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 B4GAT1O43505 415 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 ECEL1O95672 775 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 CYP2A6P11509 494 aaPredicted RBP23.1■■□□□ 1.29
U2AF1-202ENST00000380276 NFKBIAP25963 317 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 CD82P27701 267 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 MIPP30301 263 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 SLC10A7Q0GE19 358 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 DOK6Q6PKX4 331 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 TP53INP2Q8IXH6 220 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 GPBAR1Q8TDU6 330 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 NSMCE3Q96MG7 304 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 PSKH2Q96QS6 385 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 ANO10Q9NW15 660 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 SUFUQ9UMX1 484 aa23.1■■□□□ 1.29
U2AF1-202ENST00000380276 FGF1P05230 155 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 WT1P19544 449 aaPredicted RBP23.09■■□□□ 1.29
U2AF1-202ENST00000380276 ETV3P41162 512 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 TBR1Q16650 682 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 ATG14Q6ZNE5 492 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 NRROSQ86YC3 692 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 BBS5Q8N3I7 341 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 ARFGAP1Q8N6T3 406 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 PATE1Q8WXA2 126 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 CCDC74BQ96LY2 380 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 ZWILCHQ9H900 591 aa23.09■■□□□ 1.29
U2AF1-202ENST00000380276 CWC15Q9P013 229 aaKnown RBP23.09■■□□□ 1.29
U2AF1-202ENST00000380276 A0A1W2PQ67 120 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 STMND1H3BQB6 276 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 H3BRJ5 948 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 HEXIM1O94992 359 aaKnown RBP23.08■■□□□ 1.29
U2AF1-202ENST00000380276 CEACAM5P06731 702 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 SFTPCP11686 197 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 CSRP3P50461 194 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 ATP1A2P50993 1020 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 CDK3Q00526 305 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 PLEKHA7Q6IQ23 1121 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 TEX101Q9BY14 249 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 TRIM7Q9C029 511 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 KCTD5Q9NXV2 234 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 IL17BQ9UHF5 180 aa23.08■■□□□ 1.29
U2AF1-202ENST00000380276 IGHV5-10-1A0A0J9YXX1 117 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 SOCS5O75159 536 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 MPSTP25325 297 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 ARL4AP40617 200 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 POLD2P49005 469 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 MAXP61244 160 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 ASIC2Q16515 512 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 STX1AQ16623 288 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 NKAIN2Q5VXU1 208 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 HSD11B1LQ7Z5J1 315 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 DTX1Q86Y01 620 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 LZTR1Q8N653 840 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 NSMCE1Q8WV22 266 aa23.07■■□□□ 1.28
U2AF1-202ENST00000380276 ZNF653Q96CK0 615 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms