RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 SPATA6LQ8N4H0 392 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 AGBL3Q8NEM8 1001 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 IL31RAQ8NI17 732 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 MCFD2Q8NI22 146 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ATL1Q8WXF7 558 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ROPN1LQ96C74 230 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 MYRFLQ96LU7 910 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 SNRNP25Q9BV90 132 aaKnown RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 RAB6CQ9H0N0 254 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 CYTH4Q9UIA0 394 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ANKRD6Q9Y2G4 727 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PCDHA10Q9Y5I2 948 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ISPDA4D126 451 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ZNF99A8MXY4 864 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 HOXC11O43248 304 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 MTSS1O43312 755 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 CAPN1P07384 714 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 THRBP10828 461 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PSMB9P28065 219 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 CD40LGP29965 261 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 RFC2P35250 354 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 CASP3P42574 277 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 CLK1P49759 484 aaKnown RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 MCCD1P59942 119 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 HIST2H2ACQ16777 129 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PPP1R3AQ16821 1122 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 HSDL1Q3SXM5 330 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ZNF667Q5HYK9 610 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 CEP78Q5JTW2 689 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 XAF1Q6GPH4 301 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 SWSAP1Q6NVH7 229 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PIWIL4Q7Z3Z4 852 aaKnown RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 KCNMB4Q86W47 210 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 RALGPS2Q86X27 583 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 RNF135Q8IUD6 432 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 MICU2Q8IYU8 434 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 KDM1BQ8NB78 822 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 TMEM143Q96AN5 459 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ATG4CQ96DT6 458 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 KCTD14Q9BQ13 255 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 TMEM246Q9BRR3 403 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 IDI2Q9BXS1 227 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 C6orf62Q9GZU0 229 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 MIR1-1HGQ9H1L0 117 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 POMKQ9H5K3 350 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PLEKHA5Q9HAU0 1116 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 SCUBE2Q9NQ36 999 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ACTR3BQ9P1U1 418 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 KLHL8Q9P2G9 620 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PNMA8BQ9ULN7 279 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 NDUFAF1Q9Y375 327 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 SAGE2PA6NJ88 616 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ARPC2O15144 300 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 DLX3O60479 287 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ENDOD1O94919 500 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 INMTO95050 263 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PRKCAP17252 672 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 CRHBPP24387 322 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PSMB4P28070 264 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 S100A5P33763 92 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ARL4AP40617 200 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 NR2C2P49116 596 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 KPNA2P52292 529 aaKnown RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 CDH8P55286 799 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 CA9Q16790 459 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ARHGEF16Q5VV41 709 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 SLX4IPQ5VYV7 408 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 P2RY8Q86VZ1 359 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 LGI2Q8N0V4 545 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PAF1Q8N7H5 531 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PIK3C3Q8NEB9 887 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 OR52K1Q8NGK4 314 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 OR6Q1Q8NGQ2 317 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 NDNFQ8TB73 568 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 SPPL2BQ8TCT7 592 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 TRIB2Q92519 343 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 OMA1Q96E52 524 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PGLYRP2Q96PD5 576 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 GMLQ99445 158 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 LGMNQ99538 433 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ZNF670Q9BS34 389 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 C2orf49Q9BVC5 232 aaPredicted RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 FTHL17Q9BXU8 183 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 EMILIN2Q9BXX0 1053 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 RHOBTB2Q9BYZ6 727 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 PIF1Q9H611 641 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 RPRD1BQ9NQG5 326 aaKnown RBP7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ITM2CQ9NQX7 267 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 WDR70Q9NW82 654 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 MTMR10Q9NXD2 777 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 ARHGAP28Q9P2N2 729 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 VANGL2Q9ULK5 521 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 UGT2A1Q9Y4X1 527 aa7.3□□□□□ -1.24
TRIM6-202ENST00000380097 A0A0J9YYE9 177 aa7.29□□□□□ -1.24
TRIM6-202ENST00000380097 FAM25AB3EWG3 89 aa7.29□□□□□ -1.24
TRIM6-202ENST00000380097 FAM25CB3EWG5 89 aa7.29□□□□□ -1.24
TRIM6-202ENST00000380097 FAM25GB3EWG6 89 aa7.29□□□□□ -1.24
TRIM6-202ENST00000380097 RNF103O00237 685 aa7.29□□□□□ -1.24
TRIM6-202ENST00000380097 NME4O00746 187 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms