RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 DDX47Q9H0S4 455 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 USP29Q9HBJ7 922 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 WDR70Q9NW82 654 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 TMEM248Q9NWD8 314 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 TMCC1O94876 653 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 POP4O95707 220 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 CSF2P04141 144 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 PRB1P04280 392 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 EPHB2P29323 1055 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 COILP38432 576 aaPredicted RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 NR2C2P49116 596 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 CFAP58Q5T655 872 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 BROXQ5VW32 411 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 C8orf74Q6P047 294 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 FOXR1Q6PIV2 292 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 GDPD4Q6W3E5 623 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 MAATS1Q7Z4T9 603 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 TTC7BQ86TV6 843 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 RBFAQ8N0V3 343 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 CACTIN-AS1Q8N1I8 211 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 PAF1Q8N7H5 531 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 NETO2Q8NC67 525 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 DENND6BQ8NEG7 585 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 WRAP53Q9BUR4 548 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 NCKIPSDQ9NZQ3 722 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 SPASTQ9UBP0 616 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 FEZ2Q9UHY8 353 aaPredicted RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 DOLKQ9UPQ8 538 aa13.84□□□□□ -0.19
PRPF18-202ENST00000378572 R3HDM2Q9Y2K5 976 aaKnown RBP13.84□□□□□ -0.19
PRPF18-202ENST00000378572 ZSCAN5CA6NGD5 496 aaPredicted RBP13.83□□□□□ -0.2
PRPF18-202ENST00000378572 FGF10O15520 208 aaPredicted RBP13.83□□□□□ -0.2
PRPF18-202ENST00000378572 CREB3O43889 395 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 GP1BAP07359 652 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 GIMD1P0DJR0 217 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 C1orf61Q13536 156 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 PTK2BQ14289 1009 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 PAFAH1B3Q15102 231 aaKnown RBP13.83□□□□□ -0.2
PRPF18-202ENST00000378572 NOMO1Q15155 1222 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 NR0B2Q15466 257 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 TCEA2Q15560 299 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 ERCC6LQ2NKX8 1250 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 MYLK3Q32MK0 819 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 PRRT3Q5FWE3 981 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 C3orf38Q5JPI3 329 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 GUSBP11Q6P575 273 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 CCDC137Q6PK04 289 aaKnown RBP13.83□□□□□ -0.2
PRPF18-202ENST00000378572 GPR155Q7Z3F1 870 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 NLRP14Q86W24 1093 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 SPACA3Q8IXA5 215 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 KLHL7Q8IXQ5 586 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 FAM181AQ8N9Y4 354 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 ZNF248Q8NDW4 579 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 SLC35B2Q8TB61 432 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 ACTL9Q8TC94 416 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 BTN2A2Q8WVV5 523 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 C1orf54Q8WWF1 131 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 SLC39A7Q92504 469 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 GLMNQ92990 594 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 EXOC2Q96KP1 924 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 C1QTNF2Q9BXJ5 285 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 SLC13A1Q9BZW2 595 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 PRORYQ9H606 182 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 NEU3Q9UQ49 428 aa13.83□□□□□ -0.2
PRPF18-202ENST00000378572 DRG1Q9Y295 367 aaKnown RBP13.83□□□□□ -0.2
PRPF18-202ENST00000378572 UQCRHLA0A096LP55 91 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 MUSKO15146 869 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 KDELR3O43731 214 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 LIASO43766 372 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 MMP20O60882 483 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 TM7SF2O76062 418 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 CD160O95971 181 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 TUBBP07437 444 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 UQCRHP07919 91 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 AMPD1P23109 780 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 DYNLT1P63172 113 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 OTUD4Q01804 1114 aaKnown RBP13.82□□□□□ -0.2
PRPF18-202ENST00000378572 OASLQ15646 514 aaKnown RBP13.82□□□□□ -0.2
PRPF18-202ENST00000378572 TPRG1LQ5T0D9 272 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 ARTNQ5T4W7 220 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 FAXCQ5TGI0 409 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 NCBP2-AS2Q69YL0 99 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 BZW1Q7L1Q6 419 aaKnown RBP13.82□□□□□ -0.2
PRPF18-202ENST00000378572 PHACTR4Q8IZ21 702 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 LSMEM2Q8N112 164 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 ATL2Q8NHH9 583 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 GRK7Q8WTQ7 553 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 P3H4Q92791 437 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 LENG8Q96PV6 779 aaPredicted RBP13.82□□□□□ -0.2
PRPF18-202ENST00000378572 LRRC1Q9BTT6 524 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 RETREG1Q9H6L5 497 aa13.82□□□□□ -0.2
PRPF18-202ENST00000378572 FAM187AA6NFU0 413 aa13.81□□□□□ -0.2
PRPF18-202ENST00000378572 WASH4PA8MWX3 477 aa13.81□□□□□ -0.2
PRPF18-202ENST00000378572 SPINT1O43278 529 aa13.81□□□□□ -0.2
PRPF18-202ENST00000378572 DAPK3O43293 454 aa13.81□□□□□ -0.2
PRPF18-202ENST00000378572 RAD51CO43502 376 aa13.81□□□□□ -0.2
PRPF18-202ENST00000378572 ANXA6P08133 673 aa13.81□□□□□ -0.2
PRPF18-202ENST00000378572 PECAM1P16284 738 aaPredicted RBP13.81□□□□□ -0.2
PRPF18-202ENST00000378572 ERCC2P18074 760 aa13.81□□□□□ -0.2
PRPF18-202ENST00000378572 IGFALSP35858 605 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms