RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 RAB2BQ8WUD1 216 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 COPS5Q92905 334 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 C19orf60Q96EN9 201 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 ALG9Q9H6U8 611 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 ACTR3BQ9P1U1 418 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 GTF2IRD1Q9UHL9 959 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 RAD54BQ9Y620 910 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 EVPLQ92817 2033 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 PTGES3LE9PB15 166 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 DCLK1O15075 740 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 BCAS1O75363 584 aaPredicted RBP15.89■□□□□ 0.13
CKAP4-201ENST00000378026 LDLRP01130 860 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 NKX2-5P52952 324 aaPredicted RBP15.89■□□□□ 0.13
CKAP4-201ENST00000378026 PAFAH1B3Q15102 231 aaKnown RBP15.89■□□□□ 0.13
CKAP4-201ENST00000378026 SF3B4Q15427 424 aaKnown RBP eCLIP15.89■□□□□ 0.13
CKAP4-201ENST00000378026 FBXO48Q5FWF7 155 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 CLEC4FQ8N1N0 589 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 ZFP90Q8TF47 636 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 C18orf25Q96B23 403 aaPredicted RBP15.89■□□□□ 0.13
CKAP4-201ENST00000378026 FAR2Q96K12 515 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 ZNF347Q96SE7 839 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 FUNDC2Q9BWH2 189 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 RHOBTB2Q9BYZ6 727 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.89■□□□□ 0.13
CKAP4-201ENST00000378026 SHROOM3Q8TF72 1996 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 CLDN5O00501 218 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 AXIN1O15169 862 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 SEC14L2O76054 403 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 PTPRAP18433 802 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 UGT3A2Q3SY77 523 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 EXOC8Q8IYI6 725 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 ROPN1LQ96C74 230 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 KCNA7Q96RP8 456 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 OLFM1Q99784 485 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 TDRD1Q9BXT4 1180 aaKnown RBP15.89■□□□□ 0.13
CKAP4-201ENST00000378026 IGSF5Q9NSI5 407 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 BTRCQ9Y297 605 aa15.89■□□□□ 0.13
CKAP4-201ENST00000378026 NDUFB5O43674 189 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 CPNE6O95741 557 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 CPB1P15086 417 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 BAG6P46379 1132 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 FPGSQ05932 587 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 BCL2A1Q16548 175 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 UGP2Q16851 508 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 NBPF12Q5TAG4 269 aaPredicted RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 OTUD1Q5VV17 481 aaPredicted RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 LDB1Q86U70 411 aaPredicted RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 DNERQ8NFT8 737 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 LRRC58Q96CX6 371 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 HDAC11Q96DB2 347 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 FAM167AQ96KS9 214 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 SLC30A3Q99726 388 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 KCTD14Q9BQ13 255 aaPredicted RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 EXD2Q9NVH0 621 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 NSMCE4AQ9NXX6 385 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 ANAPC2Q9UJX6 822 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 LRRC14BA6NHZ5 514 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 TRIM64BA6NI03 449 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 FXYD1O00168 92 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 TCEA1P23193 301 aaKnown RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 GSK3BP49841 420 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 CLCQ05315 142 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 PPP1R8Q12972 351 aaKnown RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 ZNF846Q147U1 533 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 INAVAQ3KP66 663 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 PAGE2BQ5JRK9 111 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 FKBP1CQ5VVH2 108 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 NAPEPLDQ6IQ20 393 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 LCN8Q6JVE9 175 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 SLCO6A1Q86UG4 719 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 STK32CQ86UX6 486 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 ANKRD49Q8WVL7 239 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 C17orf50Q8WW18 174 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 TUBA1CQ9BQE3 449 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 MROQ9BYG7 248 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 EHD1Q9H4M9 534 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 PRMT7Q9NVM4 692 aaPredicted RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 SLAMF8Q9P0V8 285 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 KLQ9UEF7 1012 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 A6NL46 340 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 I6L893 689 aaPredicted RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 JRKO75564 520 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 CHRNA4P43681 627 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 KCNC1P48547 511 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 FOXA1P55317 472 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 TNFAIP2Q03169 654 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 NFYCQ13952 458 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 TECRLQ5HYJ1 363 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 NOMO2Q5JPE7 1267 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 HABP4Q5JVS0 413 aaKnown RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 DEPDC1Q5TB30 811 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 IQSEC1Q6DN90 963 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 PKN3Q6P5Z2 889 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 METTL7BQ6UX53 244 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 TUBGCP3Q96CW5 907 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 TEPSINQ96N21 525 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 HOPXQ9BPY8 73 aaPredicted RBP15.88■□□□□ 0.13
CKAP4-201ENST00000378026 CHID1Q9BWS9 393 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 ALG2Q9H553 416 aa15.88■□□□□ 0.13
CKAP4-201ENST00000378026 RCOR3Q9P2K3 495 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms