RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ALAS2P22557 587 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 SPAM1P38567 509 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 LIPMQ5VYY2 423 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 HERVK_113Q902F9 699 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 PRCCQ92733 491 aaPredicted RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 REXO5Q96IC2 774 aaKnown RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 RPS6KA6Q9UK32 745 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 FSBPO95073 299 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 SSR2P43308 183 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 ACLYP53396 1101 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 CDH4P55283 916 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 GRSF1Q12849 480 aaKnown RBP eCLIP13.64□□□□□ -0.23
GPC6-201ENST00000377047 TMPRSS11BQ86T26 416 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 ARMC8Q8IUR7 673 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 CLP1Q92989 425 aaKnown RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 EMID1Q96A84 441 aaPredicted RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 TEKT5Q96M29 485 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 CEP44Q9C0F1 390 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 MTF2Q9Y483 593 aaPredicted RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 RICTORQ6R327 1708 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 TRIM43BA6NCK2 446 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 RCCD1A6NED2 376 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 CCNYL3P0C7X3 344 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 FUT2Q10981 343 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 SEMA5AQ13591 1074 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 TAPT1Q6NXT6 567 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 ZFP1Q6P2D0 407 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 SLC30A9Q6PML9 568 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 PACS1Q6VY07 963 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 ERVW-1Q9UQF0 538 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 FCF1Q9Y324 198 aaKnown RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 SCN2BO60939 215 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 MYBL2P10244 700 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 TEX44Q53QW1 395 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 UXS1Q8NBZ7 420 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 RNASE11Q8TAA1 199 aaKnown RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 PANX1Q96RD7 426 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 SPRTNQ9H040 489 aaPredicted RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 MAF1Q9H063 256 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 SUCOQ9UBS9 1254 aaKnown RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 FFAR2O15552 330 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 ZMPSTE24O75844 475 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 LILRA4P59901 499 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 LSM12Q3MHD2 195 aaKnown RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 WASHC2DQ5SRD0 308 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 DDHD1Q8NEL9 900 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 PPCDCQ96CD2 204 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 PRRG4Q9BZD6 226 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 KCTD5Q9NXV2 234 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 COLEC10Q9Y6Z7 277 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 SLC28A2O43868 658 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 BUD31P41223 144 aaPredicted RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 NEDD8Q15843 81 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 C11orf88Q6PI97 169 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 STXBP5LQ9Y2K9 1186 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 POLR3HQ9Y535 204 aaPredicted RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 LRRC72A6NJI9 287 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 SCAMP1O15126 338 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 MRPS22P82650 360 aaKnown RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 PURAQ00577 322 aaKnown RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 INO80DQ53TQ3 878 aaPredicted RBP13.63□□□□□ -0.23
GPC6-201ENST00000377047 PMF1Q6P1K2 205 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 ZBTB2Q8N680 514 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 NMUR1Q9HB89 426 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 UBR1Q8IWV7 1749 aa13.63□□□□□ -0.23
GPC6-201ENST00000377047 AZIN1O14977 448 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 DSC2Q02487 901 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 GAD2Q05329 585 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 GPM6BQ13491 265 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 ZNF618Q5T7W0 954 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 FAM220AQ7Z4H9 259 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 RDH11Q8TC12 318 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 AP2M1Q96CW1 435 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 RBPJLQ9UBG7 517 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 CIDEBQ9UHD4 219 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 MAT2AP31153 395 aaKnown RBP13.62□□□□□ -0.23
GPC6-201ENST00000377047 DGKGP49619 791 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 TEAD4Q15561 434 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 C10orf107Q8IVU9 208 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 DHRSXQ8N5I4 330 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 OR7D4Q8NG98 312 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 ACMSDQ8TDX5 336 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 TNFRSF25Q93038 417 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 LMLNQ96KR4 655 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 AIF1LQ9BQI0 150 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 RAB21Q9UL25 225 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 H0YC42 278 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 ATP6V1G2O95670 118 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 ABHD2P08910 425 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 MMP8P22894 467 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 GNA12Q03113 381 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 GPR180Q86V85 440 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 PLD4Q96BZ4 506 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 HMCESQ96FZ2 354 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 RMND5BQ96G75 393 aaPredicted RBP13.62□□□□□ -0.23
GPC6-201ENST00000377047 MCMBPQ9BTE3 642 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 C6orf62Q9GZU0 229 aaPredicted RBP13.62□□□□□ -0.23
GPC6-201ENST00000377047 SNX10Q9Y5X0 201 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 ACTL7BQ9Y614 415 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 A0A1B0GVM2 712 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 427.1 ms