RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 SLC39A13Q96H72 371 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 ERVK-6Q9BXR3 956 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 RBM38Q9H0Z9 239 aaKnown RBP25.34■■□□□ 1.65
C9orf40-201ENST00000376854 ABI2Q9NYB9 513 aaPredicted RBP25.34■■□□□ 1.65
C9orf40-201ENST00000376854 HACD3Q9P035 362 aa25.34■■□□□ 1.65
C9orf40-201ENST00000376854 ANKRD33BA6NCL7 494 aa25.33■■□□□ 1.65
C9orf40-201ENST00000376854 MANSC4A6NHS7 340 aaPredicted RBP25.33■■□□□ 1.65
C9orf40-201ENST00000376854 CDH13P55290 713 aa25.33■■□□□ 1.65
C9orf40-201ENST00000376854 NFKB2Q00653 900 aa25.33■■□□□ 1.65
C9orf40-201ENST00000376854 TRIM32Q13049 653 aa25.33■■□□□ 1.65
C9orf40-201ENST00000376854 B3GNT6Q6ZMB0 384 aa25.33■■□□□ 1.65
C9orf40-201ENST00000376854 FUNDC1Q8IVP5 155 aa25.33■■□□□ 1.65
C9orf40-201ENST00000376854 TMEM248Q9NWD8 314 aa25.33■■□□□ 1.65
C9orf40-201ENST00000376854 A0A0U1RQF3 1178 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 ALDOCP09972 364 aaKnown RBP25.32■■□□□ 1.64
C9orf40-201ENST00000376854 SLC2A3P11169 496 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 TBX4P57082 545 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 BIRC2Q13490 618 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 UGT3A2Q3SY77 523 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 MS4A13Q5J8X5 152 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 AMIGO2Q86SJ2 522 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 CLYBLQ8N0X4 340 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 RYBPQ8N488 228 aaPredicted RBP25.32■■□□□ 1.64
C9orf40-201ENST00000376854 EFHD1Q9BUP0 239 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 OSBPL11Q9BXB4 747 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 DMTF1Q9Y222 760 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 ARHGEF37A1IGU5 675 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 KPNA6O60684 536 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 CYBAP13498 195 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 TYMPP19971 482 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 GPX3P22352 226 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 SH3BP2P78314 561 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 KIF19Q2TAC6 998 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 MAP7D1Q3KQU3 841 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 MON1AQ86VX9 555 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 DHFR2Q86XF0 187 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 TRIB2Q92519 343 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 UROC1Q96N76 676 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 ARHGAP39Q9C0H5 1083 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 AKTIPQ9H8T0 292 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 CNOT6Q9ULM6 557 aaKnown RBP25.32■■□□□ 1.64
C9orf40-201ENST00000376854 PADI4Q9UM07 663 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 RNF11Q9Y3C5 154 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 PATJQ8NI35 1801 aa25.32■■□□□ 1.64
C9orf40-201ENST00000376854 LDB2O43679 373 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 STAMBPO95630 424 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 ATXN1LP0C7T5 689 aaKnown RBP25.31■■□□□ 1.64
C9orf40-201ENST00000376854 CD1DP15813 335 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 PAX3P23760 479 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 PITRM1Q5JRX3 1037 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 TEX26Q8N6G2 289 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 ARRDC2Q8TBH0 407 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 ROPN1LQ96C74 230 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 TBATAQ96M53 351 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 UHRF1Q96T88 793 aaPredicted RBP25.31■■□□□ 1.64
C9orf40-201ENST00000376854 NOL11Q9H8H0 719 aaKnown RBP25.31■■□□□ 1.64
C9orf40-201ENST00000376854 NLRC5Q86WI3 1866 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 PTPRDP23468 1912 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 HTTP42858 3142 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 HSPA8P11142 646 aaKnown RBP25.31■■□□□ 1.64
C9orf40-201ENST00000376854 FDXRP22570 491 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 ETFBP38117 255 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 NR1H2P55055 460 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 TXNL4AP83876 142 aaKnown RBP25.31■■□□□ 1.64
C9orf40-201ENST00000376854 CRHR2Q13324 411 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 CYTH1Q15438 398 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 HMBOX1Q6NT76 420 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 PGBD5Q8N414 524 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 PTGR2Q8N8N7 351 aaPredicted RBP25.31■■□□□ 1.64
C9orf40-201ENST00000376854 PCYOX1LQ8NBM8 494 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 PPWD1Q96BP3 646 aaKnown RBP25.31■■□□□ 1.64
C9orf40-201ENST00000376854 SLC29A1Q99808 456 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 CIB1Q99828 191 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 ADAM2Q99965 735 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 POLR3BQ9NW08 1133 aaPredicted RBP25.31■■□□□ 1.64
C9orf40-201ENST00000376854 SCML2Q9UQR0 700 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 DNAJC15Q9Y5T4 150 aa25.31■■□□□ 1.64
C9orf40-201ENST00000376854 MSANTD2Q6P1R3 559 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 RETREG3Q86VR2 466 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 DTNBP1Q96EV8 351 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 HIC2Q96JB3 615 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 A0A0J9YYE9 177 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 A0A1B0GTW7 788 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 LOC285095A0A1B0GVY8 99 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 ZNF839A8K0R7 811 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 GPR15P49685 360 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 NME5P56597 212 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 DDR2Q16832 855 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 GEN1Q17RS7 908 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 ZNF549Q6P9A3 640 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 TADA1Q96BN2 335 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 UPF3AQ9H1J1 476 aaKnown RBP25.3■■□□□ 1.64
C9orf40-201ENST00000376854 GMPR2Q9P2T1 348 aaKnown RBP25.3■■□□□ 1.64
C9orf40-201ENST00000376854 GABRQQ9UN88 632 aa25.3■■□□□ 1.64
C9orf40-201ENST00000376854 MIA3Q5JRA6 1907 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 NR5A2O00482 541 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 GLP2RO95838 553 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 GOT2P00505 430 aaKnown RBP25.29■■□□□ 1.64
C9orf40-201ENST00000376854 RPS6KA3P51812 740 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 USP46P62068 366 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms