RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 MINDY1Q8N5J2 469 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 GLT1D1Q96MS3 346 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 CSF3RQ99062 836 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 EIF2AQ9BY44 585 aaKnown RBP16.54■□□□□ 0.24
TRIM39-201ENST00000376656 DUSP16Q9BY84 665 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 BRD8Q9H0E9 1235 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 CCDC68Q9H2F9 335 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 ANGPT2O15123 496 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 ESRRBO95718 433 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 C7P10643 843 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 CHRNA4P43681 627 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 KCNC1P48547 511 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 TKTL1P51854 596 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 CDH13P55290 713 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 FBXO47Q5MNV8 452 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 TUBA1CQ9BQE3 449 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 ATXN3LQ9H3M9 355 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 PLEKHA5Q9HAU0 1116 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 DSEQ9UL01 958 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 NDUFAF1Q9Y375 327 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 AP3B1O00203 1094 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 LTA4HP09960 611 aaKnown RBP16.53■□□□□ 0.24
TRIM39-201ENST00000376656 TMBIM6P55061 237 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 ADARB1P78563 741 aaKnown RBP16.53■□□□□ 0.24
TRIM39-201ENST00000376656 SEPT6Q14141 434 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 GRB7Q14451 532 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 ZNF484Q5JVG2 852 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 TMEM53Q6P2H8 277 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 MICALL2Q8IY33 904 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 NTAN1Q96AB6 310 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 FBXW11Q9UKB1 542 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 V9GYQ6 96 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 PPP6CO00743 305 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 BDNFP23560 247 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 AXLP30530 894 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 EIF2B2P49770 351 aaKnown RBP16.53■□□□□ 0.24
TRIM39-201ENST00000376656 ZIK1Q3SY52 487 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-201ENST00000376656 PRMT9Q6P2P2 845 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 ZNF773Q6PK81 442 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 OSTM1Q86WC4 334 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 LRRC58Q96CX6 371 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 HEPHQ9BQS7 1158 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 CORO1BQ9BR76 489 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 C1orf50Q9BV19 199 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 TDRD1Q9BXT4 1180 aaKnown RBP16.53■□□□□ 0.24
TRIM39-201ENST00000376656 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-201ENST00000376656 GINS2Q9Y248 185 aa16.53■□□□□ 0.24
TRIM39-201ENST00000376656 YJEFN3A6XGL0 299 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 DNAJB2P25686 324 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 SCAPQ12770 1279 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 INTS6LQ5JSJ4 861 aaKnown RBP16.52■□□□□ 0.24
TRIM39-201ENST00000376656 BTLAQ7Z6A9 289 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 B3GALNT2Q8NCR0 500 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 CNDP2Q96KP4 475 aaKnown RBP16.52■□□□□ 0.24
TRIM39-201ENST00000376656 MUS81Q96NY9 551 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 SLC9A7Q96T83 725 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 SLX1AQ9BQ83 275 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 ALG9Q9H6U8 611 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 DERAQ9Y315 318 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 FNDC1Q4ZHG4 1894 aaPredicted RBP16.52■□□□□ 0.24
TRIM39-201ENST00000376656 TCRBV5S2A0A599 114 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 CLPXO76031 633 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 SEC14L2O76054 403 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 GPIP06744 558 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 MBL2P11226 248 aaPredicted RBP16.52■□□□□ 0.24
TRIM39-201ENST00000376656 NPR3P17342 541 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 IMPDH1P20839 514 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 HCAR3P49019 387 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 TMED10P49755 219 aaKnown RBP16.52■□□□□ 0.24
TRIM39-201ENST00000376656 EN1Q05925 392 aaPredicted RBP16.52■□□□□ 0.24
TRIM39-201ENST00000376656 GALNT1Q10472 559 aaPredicted RBP16.52■□□□□ 0.24
TRIM39-201ENST00000376656 BFSP2Q13515 415 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 PYCR3Q53H96 274 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 RABL3Q5HYI8 236 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 NEPROQ6NW34 567 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 PAQR9Q6ZVX9 377 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 SMG8Q8ND04 991 aaKnown RBP16.52■□□□□ 0.24
TRIM39-201ENST00000376656 SGCDQ92629 289 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 ITPKCQ96DU7 683 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 ULBP1Q9BZM6 244 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 LHPPQ9H008 270 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 GOLGA2P5Q9HBQ8 144 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 MRM3Q9HC36 420 aaKnown RBP16.52■□□□□ 0.24
TRIM39-201ENST00000376656 DDIT4Q9NX09 232 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 DNAJC15Q9Y5T4 150 aa16.52■□□□□ 0.24
TRIM39-201ENST00000376656 H0Y858 1186 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 LRIG2O94898 1065 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 SHMT2P34897 504 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 UNC50Q53HI1 259 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 ZNF678Q5SXM1 525 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 GOLM1Q8NBJ4 401 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 DNAJB14Q8TBM8 379 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 KLRG1Q96E93 195 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 TLR9Q9NR96 1032 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 TREX1Q9NSU2 369 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 AAR2Q9Y312 384 aaKnown RBP16.52■□□□□ 0.23
TRIM39-201ENST00000376656 PCDHA9Q9Y5H5 950 aa16.52■□□□□ 0.23
TRIM39-201ENST00000376656 PCNTO95613 3336 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 KRBA1A5PL33 1030 aa16.51■□□□□ 0.23
TRIM39-201ENST00000376656 PSMD3O43242 534 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms