RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 NPY2RP49146 381 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 CCT8P50990 548 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 CYBRD1Q53TN4 286 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 GJC2Q5T442 439 aaPredicted RBP11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 ARHGAP36Q6ZRI8 547 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 PIWIL4Q7Z3Z4 852 aaKnown RBP11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 SNX29P2Q8IUI4 249 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 SULF1Q8IWU6 871 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 CHPT1Q8WUD6 406 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 HDAC10Q969S8 669 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 OLFM1Q99784 485 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 SLC25A23Q9BV35 468 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 ZFYVE28Q9HCC9 887 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 CMTM6Q9NX76 183 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 SNTG2Q9NY99 539 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 HACL1Q9UJ83 578 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 MOSPD1Q9UJG1 213 aa11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 PTBP2Q9UKA9 531 aaKnown RBP11.53□□□□□ -0.56
TM9SF2-201ENST00000376387 MCM3APO60318 1980 aa11.52□□□□□ -0.56
TM9SF2-201ENST00000376387 TMEM247A6NEH6 219 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 C19orf81C9J6K1 198 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 SOCS7O14512 581 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 SPTLC1O15269 473 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 COL6A1P12109 1028 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 ZNF12P17014 697 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 CES1P23141 567 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 GNL1P36915 607 aaPredicted RBP11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 KCNC1P48547 511 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 BCAT1P54687 386 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 BPIFB3P59826 476 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 BTBD8Q5XKL5 378 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 ARHGAP17Q68EM7 881 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 BTN2A1Q7KYR7 527 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 DEFB132Q7Z7B7 95 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 IFNEQ86WN2 208 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 FBXO16Q8IX29 292 aaPredicted RBP11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 ADGRG5Q8IZF4 528 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 LINC00469Q8N7U9 141 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 BPIFB6Q8NFQ5 453 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 KIFC1Q9BW19 673 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 FANCEQ9HB96 536 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 PRMT3O60678 531 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 CAPN3P20807 821 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 CDH3P22223 829 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 GPX3P22352 226 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 ATP5F1P24539 256 aaPredicted RBP11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 ARCN1P48444 511 aaKnown RBP11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 PPIL2Q13356 520 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 MAPRE2Q15555 327 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 MOGQ16653 247 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 ZIK1Q3SY52 487 aaPredicted RBP11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 PYCR3Q53H96 274 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 CELF3Q5SZQ8 465 aaKnown RBP11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 ZNF420Q8TAQ5 688 aaPredicted RBP11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 SLC16A10Q8TF71 515 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 GLMNQ92990 594 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 NPY6RQ99463 290 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 MRPL57Q9BQC6 102 aaKnown RBP11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 HEPHQ9BQS7 1158 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 ATXN3LQ9H3M9 355 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 TRIM17Q9Y577 477 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 ANKRD12Q6UB98 2062 aa11.52□□□□□ -0.57
TM9SF2-201ENST00000376387 MAGEB16A2A368 324 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 TRIM64BA6NI03 449 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 TBKBP1A7MCY6 615 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 DYNC1LI2O43237 492 aaPredicted RBP11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 TSPAN1O60635 241 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 INSRRP14616 1297 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 CHRNA4P43681 627 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 UGT3A2Q3SY77 523 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 C6orf183Q5T699 404 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 TMEM53Q6P2H8 277 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 ABRAXAS1Q6UWZ7 409 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 LARP4Q71RC2 724 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■□□□□ 10.5
TM9SF2-201ENST00000376387 PLPPR4Q7Z2D5 763 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 DDIASQ8IXT1 998 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 NIM1KQ8IY84 436 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 SMG8Q8ND04 991 aaKnown RBP11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 HNRNPABQ99729 332 aaKnown RBP11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 NANOGQ9H9S0 305 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 LTB4R2Q9NPC1 389 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 PDGFCQ9NRA1 345 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 TRAF6Q9Y4K3 522 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 A0A0J9YYE9 177 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 HTR3EA5X5Y0 456 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 FXYD1O00168 92 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 AXIN1O15169 862 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 RASAL1O95294 804 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 FYNP06241 537 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 IDO1P14902 403 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 FASP25445 335 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 HADHAP40939 763 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 RPL34P49207 117 aaKnown RBP11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 CDH13P55290 713 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 CDH17Q12864 832 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 GRB7Q14451 532 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 FAM83EQ2M2I3 478 aa11.51□□□□□ -0.57
TM9SF2-201ENST00000376387 TECRLQ5HYJ1 363 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms