RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TM6SF2Q9BZW4 377 aa14.4□□□□□ -0.1
TNFRSF1B-201ENST00000376259 EIF2B3Q9NR50 452 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1B-201ENST00000376259 CACNA2D2Q9NY47 1150 aa14.4□□□□□ -0.1
TNFRSF1B-201ENST00000376259 MARCH4Q9P2E8 410 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1B-201ENST00000376259 RCOR3Q9P2K3 495 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1B-201ENST00000376259 EVLQ9UI08 416 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1B-201ENST00000376259 FADS3Q9Y5Q0 445 aa14.4□□□□□ -0.1
TNFRSF1B-201ENST00000376259 E9PAM4 449 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GPR182O15218 404 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CNMDO75829 334 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ALDH1A2O94788 518 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TFAP2AP05549 437 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GNAO1P09471 354 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LBPP18428 481 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MYBPC1Q00872 1141 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PPIL2Q13356 520 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PAFAH1B3Q15102 231 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SLC44A4Q53GD3 710 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 STEAP4Q687X5 459 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TIGD7Q6NT04 549 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LINGO4Q6UY18 593 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 FAM110BQ8TC76 370 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GIPC3Q8TF64 312 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 STYXQ8WUJ0 223 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZBTB18Q99592 522 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TBC1D13Q9NVG8 400 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PCDHGC4Q9Y5F7 938 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TTC3P53804 2025 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 A0A1W2PQ67 120 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ARL5CA6NH57 179 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PIRO00625 290 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KCNH1O95259 989 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GSNP06396 782 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MTPNP58546 118 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CREB5Q02930 508 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GRB7Q14451 532 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 DCLRE1AQ6PJP8 1040 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 POTEHQ6S545 545 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 DNAJB4Q9UDY4 337 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 DMTF1Q9Y222 760 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SLC30A1Q9Y6M5 507 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KIAA1217Q5T5P2 1943 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 NPEPPSL1A6NEC2 478 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZNF682O95780 498 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PABPC4LP0CB38 370 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CYP4B1P13584 511 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PCSK6P29122 969 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ENTPD1P49961 510 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 RAD51Q06609 339 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 IKBKEQ14164 716 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SPESP1Q6UW49 350 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CAMK1DQ8IU85 385 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SLC22A9Q8IVM8 553 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CLYBLQ8N0X4 340 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TOP6BLQ8N6T0 577 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OR4K2Q8NGD2 314 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 FAR2Q96K12 515 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TCF12Q99081 682 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CLK4Q9HAZ1 481 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PPP2R3BQ9Y5P8 575 aa14.39□□□□□ -0.11
TNFRSF1B-201ENST00000376259 IQCF5A8MTL0 148 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 FKBP9O95302 570 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GSRP00390 522 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SERPINF2P08697 491 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CTPS1P17812 591 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CDC42EP1Q00587 391 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 DPYSQ14117 519 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LPIN1Q14693 890 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 FAM187BQ17R55 369 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CTXN3Q4LDR2 81 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PKDCCQ504Y2 493 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MARCH8Q5T0T0 291 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KIAA0319Q5VV43 1072 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GLB1LQ6UWU2 654 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 FKBP9P1Q75LS8 142 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GLT6D1Q7Z4J2 308 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KDM1BQ8NB78 822 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OR7D4Q8NG98 312 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CINPQ9BW66 212 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TMEM30AQ9NV96 361 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CIDEBQ9UHD4 219 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 RAB26Q9ULW5 256 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ORC6Q9Y5N6 252 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 A0A087X1B8 175 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LINC00854A0A1B0GVQ3 168 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TCAF2A6NFQ2 919 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PLOD2O00469 737 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PFDN6O15212 129 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CD3EAPO15446 510 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 C1QAP02745 245 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 HAPLN1P10915 354 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 EFNA1P20827 205 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CPT1AP50416 773 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 HUNKP57058 714 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CHRNB3Q05901 458 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PIGGQ5H8A4 983 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PGM2L1Q6PCE3 622 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 UGT2A3Q6UWM9 527 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 C3orf58Q8NDZ4 430 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OSBPL11Q9BXB4 747 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms