RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 PEBP4Q96S96 227 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 LGR4Q9BXB1 951 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 TEX101Q9BY14 249 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 MRPL47Q9HD33 250 aaKnown RBP23.23■■□□□ 1.31
C9orf47-202ENST00000375850 WDR70Q9NW82 654 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 PHTF1Q9UMS5 762 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 LRP4O75096 1905 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 H3BRJ5 948 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 HGSO14964 777 aaPredicted RBP23.22■■□□□ 1.31
C9orf47-202ENST00000375850 TEX33O43247 280 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 VIPR1P32241 457 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 PCK1P35558 622 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 ARL4AP40617 200 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 B4GALNT1Q00973 533 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 DPYSQ14117 519 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 MANEAQ5SRI9 462 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 NSMCE1Q8WV22 266 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 NUDCD1Q96RS6 583 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 ARHGAP9Q9BRR9 750 aa23.22■■□□□ 1.31
C9orf47-202ENST00000375850 CARS2Q9HA77 564 aaKnown RBP23.22■■□□□ 1.31
C9orf47-202ENST00000375850 CWC15Q9P013 229 aaKnown RBP23.22■■□□□ 1.31
C9orf47-202ENST00000375850 KIF26BQ2KJY2 2108 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 TMCO5BA8MYB1 307 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.21■■□□□ 1.31
C9orf47-202ENST00000375850 SLC28A2O43868 658 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 LRCH4O75427 683 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 HEXIM1O94992 359 aaKnown RBP23.21■■□□□ 1.31
C9orf47-202ENST00000375850 CPP00450 1065 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 MYBL1P10243 752 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 KRT10P13645 584 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 GPR3P46089 330 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 SLC10A7Q0GE19 358 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 NCAPHQ15003 741 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 CNGA3Q16281 694 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 DPYSL2Q16555 572 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 BOLA3Q53S33 107 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 PHF19Q5T6S3 580 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 ARHGAP36Q6ZRI8 547 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 CYP4V2Q6ZWL3 525 aaPredicted RBP23.21■■□□□ 1.31
C9orf47-202ENST00000375850 DTD2Q96FN9 168 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 GBP4Q96PP9 640 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 CLMPQ9H6B4 373 aa23.21■■□□□ 1.31
C9orf47-202ENST00000375850 LRRK1Q38SD2 2015 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 PRAMEF33A0A0G2JMD5 474 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 RHPN2P1A8MT19 583 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 PRAMEF10O60809 474 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 ITIH1P19827 911 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 CR2P20023 1033 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 BIRC2Q13490 618 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 TRA2AQ13595 282 aaKnown RBP eCLIP23.2■■□□□ 1.3
C9orf47-202ENST00000375850 TGIF1Q15583 401 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 ASIC2Q16515 512 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 TMCO3Q6UWJ1 677 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 HEATR4Q86WZ0 1026 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 DTX1Q86Y01 620 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 NDUFAF2Q8N183 169 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 CBARPQ8N350 705 aaPredicted RBP23.2■■□□□ 1.3
C9orf47-202ENST00000375850 CCL4L1Q8NHW4 92 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 ZDHHC1Q8WTX9 485 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 USP7Q93009 1102 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 DPYSL5Q9BPU6 564 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 MGME1Q9BQP7 344 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 FRMD8Q9BZ67 464 aaPredicted RBP23.2■■□□□ 1.3
C9orf47-202ENST00000375850 FAM117AQ9C073 453 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 NAT10Q9H0A0 1025 aaKnown RBP23.2■■□□□ 1.3
C9orf47-202ENST00000375850 CNOT8Q9UFF9 292 aaKnown RBP23.2■■□□□ 1.3
C9orf47-202ENST00000375850 HEMK1Q9Y5R4 338 aaPredicted RBP23.2■■□□□ 1.3
C9orf47-202ENST00000375850 AHCTF1Q8WYP5 2266 aa23.2■■□□□ 1.3
C9orf47-202ENST00000375850 ATMINO43313 823 aaPredicted RBP23.19■■□□□ 1.3
C9orf47-202ENST00000375850 FTLP02792 175 aaPredicted RBP23.19■■□□□ 1.3
C9orf47-202ENST00000375850 CEACAM5P06731 702 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 SERPINB6P35237 376 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 PRKCIP41743 596 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 CDK3Q00526 305 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 KCNC4Q03721 635 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 USP45Q70EL2 814 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 PDCD6IPQ8WUM4 868 aaKnown RBP23.19■■□□□ 1.3
C9orf47-202ENST00000375850 SCRN2Q96FV2 425 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 HSD3B7Q9H2F3 369 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 SPATS2LQ9NUQ6 558 aaKnown RBP23.19■■□□□ 1.3
C9orf47-202ENST00000375850 AIPL1Q9NZN9 384 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 TAAR2Q9P1P5 351 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 PCDHGC4Q9Y5F7 938 aa23.19■■□□□ 1.3
C9orf47-202ENST00000375850 LRRC53A6NM62 1247 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 A8MX80 341 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 GOLGA6L22H0YM25 854 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 B4GAT1O43505 415 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 FGF1P05230 155 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 IVLP07476 585 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 MAPK10P53779 464 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 CDH6P55285 790 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 DPTQ07507 201 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 LRRC49Q8IUZ0 686 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 CCDC112Q8NEF3 446 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 ZNF653Q96CK0 615 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 SEMA3CQ99985 751 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 HAUS4Q9H6D7 363 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 RTN4Q9NQC3 1192 aaKnown RBP23.18■■□□□ 1.3
C9orf47-202ENST00000375850 SLC17A4Q9Y2C5 497 aa23.18■■□□□ 1.3
C9orf47-202ENST00000375850 PPIL1Q9Y3C6 166 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms