RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 GABRDO14764 452 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 TPST1O60507 370 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 BCL10O95999 233 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 SAT1P21673 171 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 STX5Q13190 355 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 NOGQ13253 232 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 OXA1LQ15070 435 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 UPP1Q16831 310 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 NCBP2-AS2Q69YL0 99 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 CD300LGQ6UXG3 332 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 TOP6BLQ8N6T0 577 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 CCNYL1Q8N7R7 359 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 PCED1BQ96HM7 432 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 MAELQ96JY0 434 aaKnown RBP12.95□□□□□ -0.34
MSH5-204ENST00000375755 SCYL1Q96KG9 808 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 CCDC167Q9P0B6 97 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 TMEM181Q9P2C4 612 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 SLC39A10Q9ULF5 831 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 CPQQ9Y646 472 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 CASP8AP2Q9UKL3 1982 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 RNF103O00237 685 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 DPYSL4O14531 572 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 GPR182O15218 404 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 PHGDHO43175 533 aaKnown RBP12.95□□□□□ -0.34
MSH5-204ENST00000375755 NOL3O60936 208 aaKnown RBP12.95□□□□□ -0.34
MSH5-204ENST00000375755 USP12O75317 370 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 CABYRO75952 493 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 NR2C2P49116 596 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 TRIM71Q2Q1W2 868 aaKnown RBP12.95□□□□□ -0.34
MSH5-204ENST00000375755 TBCELQ5QJ74 424 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 OTUD1Q5VV17 481 aaPredicted RBP12.95□□□□□ -0.34
MSH5-204ENST00000375755 CADM3Q8N126 398 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 OR52K1Q8NGK4 314 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 CSPG4P5Q96PW8 444 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 C11orf84Q9BUA3 381 aaPredicted RBP12.95□□□□□ -0.34
MSH5-204ENST00000375755 C1orf50Q9BV19 199 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 DUSP16Q9BY84 665 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 SOX17Q9H6I2 414 aaPredicted RBP12.95□□□□□ -0.34
MSH5-204ENST00000375755 EIF2B3Q9NR50 452 aaKnown RBP12.95□□□□□ -0.34
MSH5-204ENST00000375755 SRRDQ9UH36 339 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 MID2Q9UJV3 735 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 FIS1Q9Y3D6 152 aa12.95□□□□□ -0.34
MSH5-204ENST00000375755 RNF103-CHMP3A0A140T963 221 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 DLX3O60479 287 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 CLPXO76031 633 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 B3GAT3O94766 335 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 IDUAP35475 653 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 SLC7A2P52569 658 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 FASTKQ14296 549 aaKnown RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 THOC7Q6I9Y2 204 aaKnown RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 ABRAXAS1Q6UWZ7 409 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
MSH5-204ENST00000375755 ZMIZ2Q8NF64 920 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 OR13F1Q8NGS4 319 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 KCTD4Q8WVF5 259 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 VPS39Q96JC1 886 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 ALPK1Q96QP1 1244 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 KCTD15Q96SI1 283 aaPredicted RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 OLFM1Q99784 485 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 SMOQ99835 787 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 CCM2LQ9NUG4 571 aaPredicted RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 TMLHEQ9NVH6 421 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 SEPT10Q9P0V9 454 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 MAGED2Q9UNF1 606 aaPredicted RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 MRPL42Q9Y6G3 142 aaKnown RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 CDH23Q9H251 3354 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 ZCWPW2A0A1B0GU75 182 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 CCDC162PA2VCL2 907 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 MRASO14807 208 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 KDM1AO60341 852 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 NPR3P17342 541 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 APLP1P51693 650 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 KCNJ8Q15842 424 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 DPYSL2Q16555 572 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 SAMD4BQ5PRF9 694 aaKnown RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 RDH11Q8TC12 318 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 SEPT8Q92599 483 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 FEM1CQ96JP0 617 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 TNIP3Q96KP6 325 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 CROTQ9UKG9 612 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 APOA4P06727 396 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 AVPR1AP37288 418 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 OPRL1P41146 370 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 ZBTB17Q13105 803 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 DSC3Q14574 896 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 GRM3Q14832 879 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 IRAK1BP1Q5VVH5 260 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 SLC26A9Q7LBE3 791 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 TMCO5AQ8N6Q1 288 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 STYXQ8WUJ0 223 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 MFSD3Q96ES6 412 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 CCDC138Q96M89 665 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 CSF3RQ99062 836 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 FTHL17Q9BXU8 183 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 MROQ9BYG7 248 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 UNKQ9C0B0 810 aaKnown RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 AGPAT4Q9NRZ5 378 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 SUN2Q9UH99 717 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms