RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 LIMD1Q9UGP4 676 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 EP400Q96L91 3159 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 MYO1GB0I1T2 1018 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 E9PAM4 449 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 SNAP91O60641 907 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 VPS4BO75351 444 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 C1QAP02745 245 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 OCM2P0CE71 109 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 OCMP0CE72 109 aaPredicted RBP13.16□□□□□ -0.3
CUL4A-203ENST00000375441 IDO1P14902 403 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 OR56A4Q8NGH8 313 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 SLC25A51Q9H1U9 297 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 AKTIPQ9H8T0 292 aa13.16□□□□□ -0.3
CUL4A-203ENST00000375441 LEF1Q9UJU2 399 aaPredicted RBP13.16□□□□□ -0.3
CUL4A-203ENST00000375441 UBR3Q6ZT12 1888 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 TTC24A2A3L6 582 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 SOCS7O14512 581 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 SH3BP5O60239 455 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 GABBR2O75899 941 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 MYBPC1Q00872 1141 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 FSCN1Q16658 493 aaKnown RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 GPRIN1Q7Z2K8 1008 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 ZDHHC13Q8IUH4 622 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 ERI1Q8IV48 349 aaKnown RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 ROPN1LQ96C74 230 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 SLC2A13Q96QE2 648 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 DGCR6LQ9BY27 220 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 ZYG11BQ9C0D3 744 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 SENP6Q9GZR1 1112 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 ZNF696Q9H7X3 374 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 SEPT3Q9UH03 358 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 TCAF2A6NFQ2 919 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 HOXB8P17481 243 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 CXCR3P49682 368 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 GTF2H3Q13889 308 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 RFTN1Q14699 578 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 TAPT1Q6NXT6 567 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 PIM3Q86V86 326 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 LRRC49Q8IUZ0 686 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 CENPLQ8N0S6 344 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 FBXO30Q8TB52 745 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 EMID1Q96A84 441 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 CENPNQ96H22 339 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 ACOX2Q99424 681 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 COMMD8Q9NX08 183 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 FOCADQ5VW36 1801 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 H3BMM5 538 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 HTRA2O43464 458 aaPredicted RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 MTHFD1P11586 935 aaKnown RBP13.15□□□□□ -0.3
CUL4A-203ENST00000375441 SLC2A4P14672 509 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 KCNE1P15382 129 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 IMPDH1P20839 514 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 PRKCQQ04759 706 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 TNK2Q07912 1038 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 PTPRNQ16849 979 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 ADCK1Q86TW2 530 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 LPCAT1Q8NF37 534 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 VPS33AQ96AX1 596 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 TSPAN18Q96SJ8 248 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 TBCDQ9BTW9 1192 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 GPR63Q9BZJ6 419 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 VPS45Q9NRW7 570 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 POLG2Q9UHN1 485 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 OAZ3Q9UMX2 235 aa13.15□□□□□ -0.3
CUL4A-203ENST00000375441 PRORSD1PA6NEY8 169 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 CLIC3O95833 236 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 OR4Q2P0C623 313 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 UGT1A6P19224 532 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 LIPEQ05469 1076 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 IL27RAQ6UWB1 636 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 CHSY3Q70JA7 882 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 RALGPS2Q86X27 583 aaPredicted RBP13.14□□□□□ -0.31
CUL4A-203ENST00000375441 CPSF7Q8N684 471 aaKnown RBP13.14□□□□□ -0.31
CUL4A-203ENST00000375441 HSPBAP1Q96EW2 488 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 KIF17Q9P2E2 1029 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 VPS9D1Q9Y2B5 631 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 F5H5T6 163 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 EI24O14681 340 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 GUCA1CO95843 209 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 AKT1P31749 480 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 GRIA2P42262 883 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 MERTKQ12866 999 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 GLT6D1Q7Z4J2 308 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 GPSM1Q86YR5 675 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 SFRP1Q8N474 314 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 SEPT8Q92599 483 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 MUC3BQ9H195 1237 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 ZMYM5Q9UJ78 669 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 RIMS3Q9UJD0 308 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 TDRKHQ9Y2W6 561 aaKnown RBP13.14□□□□□ -0.31
CUL4A-203ENST00000375441 A0A1W2PQH9 124 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 KDM1AO60341 852 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 SLC22A3O75751 556 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 ITGB6P18564 788 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 SLC5A3P53794 718 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 ITGADQ13349 1161 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 TSTA3Q13630 321 aaPredicted RBP13.14□□□□□ -0.31
CUL4A-203ENST00000375441 LILRA2Q8N149 483 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 OR4L1Q8NH43 312 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms