RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 CCDC78A2IDD5 438 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 HEATR9A2RTY3 570 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3FA6NER0 549 aaPredicted RBP20.64■□□□□ 0.9
NELFE-202ENST00000375429 MROH6A6NGR9 719 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 GOLGA8CPA6NN73 597 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3LB9A6J9 549 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 H0Y858 1186 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 EIF3HO15372 352 aaKnown RBP eCLIP20.64■□□□□ 0.9
NELFE-202ENST00000375429 GPR37L1O60883 481 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 C1SP09871 688 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3HP0C7X1 549 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 ZNF30P17039 623 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 LPOP22079 712 aaPredicted RBP20.64■□□□□ 0.9
NELFE-202ENST00000375429 CD6P30203 668 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 OXTRP30559 389 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 HMGCLP35914 325 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 ELK3P41970 407 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 FNTBP49356 437 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3GQ6DHY5 549 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3CQ6IPX1 549 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 CASC4Q6P4E1 433 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 HSD11B1LQ7Z5J1 315 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 ANKMY2Q8IV38 441 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 TBC1D3Q8IZP1 549 aaPredicted RBP20.64■□□□□ 0.9
NELFE-202ENST00000375429 PPHLN1Q8NEY8 458 aaKnown RBP20.64■□□□□ 0.9
NELFE-202ENST00000375429 TOE1Q96GM8 510 aaKnown RBP20.64■□□□□ 0.9
NELFE-202ENST00000375429 EBNA1BP2Q99848 306 aaKnown RBP20.64■□□□□ 0.9
NELFE-202ENST00000375429 KIFC1Q9BW19 673 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 KDM4CQ9H3R0 1056 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 IL17CQ9P0M4 197 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 SOX13Q9UN79 622 aa20.64■□□□□ 0.9
NELFE-202ENST00000375429 ZFR2Q9UPR6 939 aaKnown RBP20.64■□□□□ 0.9
NELFE-202ENST00000375429 SCN8AQ9UQD0 1980 aa20.64■□□□□ 0.89
NELFE-202ENST00000375429 PLXND1Q9Y4D7 1925 aa20.64■□□□□ 0.89
NELFE-202ENST00000375429 CCDC163A0A0D9SF12 145 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 PRR23AA6NEV1 266 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 C2orf81A6NN90 581 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 ELFN1P0C7U0 828 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 GM2AP17900 193 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 STC1P52823 247 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 RFLNAQ6ZTI6 216 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 CXorf40AQ8TE69 158 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 LRRC39Q96DD0 335 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 STAMBPL1Q96FJ0 436 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 PHACTR1Q9C0D0 580 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 PREBQ9HCU5 417 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 BPIFA1Q9NP55 256 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 CHMP2BQ9UQN3 213 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 COQ6Q9Y2Z9 468 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 MAGEB16A2A368 324 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 PRR33A8MZF0 331 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 RNGTTO60942 597 aaKnown RBP20.63■□□□□ 0.89
NELFE-202ENST00000375429 SEMA4FO95754 770 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 NMBRP28336 390 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 ZNF140P52738 457 aaPredicted RBP20.63■□□□□ 0.89
NELFE-202ENST00000375429 TSTD2Q5T7W7 516 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 SEL1L3Q68CR1 1132 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 CES3Q6UWW8 571 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 ZBED8Q8IZ13 594 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 FBXO36Q8NEA4 188 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 OR4K2Q8NGD2 314 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 OR13C4Q8NGS5 318 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 OR2T34Q8NGX1 318 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 PTCD2Q8WV60 388 aaKnown RBP20.63■□□□□ 0.89
NELFE-202ENST00000375429 TSPYL1Q9H0U9 437 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 MRM3Q9HC36 420 aaKnown RBP20.63■□□□□ 0.89
NELFE-202ENST00000375429 SAMD15Q9P1V8 674 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 SLC2A6Q9UGQ3 507 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 FBXO4Q9UKT5 387 aa20.63■□□□□ 0.89
NELFE-202ENST00000375429 A0A1W2PQU0 124 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 IGLON5A6NGN9 336 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 PSMD11O00231 422 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 C6P13671 934 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 MCM3P25205 808 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 MAGEA4P43358 317 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 LAMB3Q13751 1172 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 USP39Q53GS9 565 aaKnown RBP20.62■□□□□ 0.89
NELFE-202ENST00000375429 ESRP1Q6NXG1 681 aaKnown RBP20.62■□□□□ 0.89
NELFE-202ENST00000375429 NEK5Q6P3R8 708 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 Q6ZVL8 140 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 TECPR1Q7Z6L1 1165 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 TMEM135Q86UB9 458 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 WDR5BQ86VZ2 330 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 STYXQ8WUJ0 223 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 MFSD3Q96ES6 412 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 DNAJC1Q96KC8 554 aaKnown RBP20.62■□□□□ 0.89
NELFE-202ENST00000375429 COQ10AQ96MF6 247 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 FCRL3Q96P31 734 aaPredicted RBP20.62■□□□□ 0.89
NELFE-202ENST00000375429 GPR174Q9BXC1 333 aa20.62■□□□□ 0.89
NELFE-202ENST00000375429 MBD1Q9UIS9 605 aaPredicted RBP20.62■□□□□ 0.89
NELFE-202ENST00000375429 FAM237BA0A1B0GVD1 139 aa20.61■□□□□ 0.89
NELFE-202ENST00000375429 LRRC72A6NJI9 287 aa20.61■□□□□ 0.89
NELFE-202ENST00000375429 C10orf142B7Z368 130 aa20.61■□□□□ 0.89
NELFE-202ENST00000375429 STX7O15400 261 aaKnown RBP20.61■□□□□ 0.89
NELFE-202ENST00000375429 TUBBP07437 444 aa20.61■□□□□ 0.89
NELFE-202ENST00000375429 SPINT3P49223 89 aa20.61■□□□□ 0.89
NELFE-202ENST00000375429 PPP2CBP62714 309 aa20.61■□□□□ 0.89
NELFE-202ENST00000375429 RPS21P63220 83 aaKnown RBP20.61■□□□□ 0.89
NELFE-202ENST00000375429 PPP2CAP67775 309 aa20.61■□□□□ 0.89
NELFE-202ENST00000375429 TMPRSS15P98073 1019 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms