RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 SH3PXD2AQ5TCZ1 1133 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 IL23RQ5VWK5 629 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 FAM180BQ6P0A1 224 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CREB3L2Q70SY1 520 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CHST9Q7L1S5 443 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 UEVLDQ8IX04 471 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 IQCF1Q8N6M8 205 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 KIAA1958Q8N8K9 716 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PNLDC1Q8NA58 520 aaKnown RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 INO80EQ8NBZ0 244 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 DTD1Q8TEA8 209 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 COG8Q96MW5 612 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 TREX2Q9BQ50 279 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CHIAQ9BZP6 476 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 LINC00597Q9H2U6 94 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PPCSQ9HAB8 311 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 GCM1Q9NP62 436 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 KBTBD4Q9NVX7 518 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 P4HTMQ9NXG6 502 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 EURLQ9NYK6 297 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 YTHDF2Q9Y5A9 579 aaKnown RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PHLPP2Q6ZVD8 1323 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 MAP3K5Q99683 1374 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 BOLA2-SMG1P6H3BVE0 249 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ERAL1O75616 437 aaKnown RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 KDM4BO94953 1096 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PDE8BO95263 885 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 NTRK1P04629 796 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ALPPP05187 535 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 LPLP06858 475 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 IFNGR1P15260 489 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 S100PP25815 95 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CDC25BP30305 580 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 GLRBP48167 497 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 GEMIN4P57678 1058 aaKnown RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 SLC6A3Q01959 620 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 RESTQ13127 1097 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CYP2A13Q16696 494 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PDSS2Q86YH6 399 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 OR56B2PQ8NGI1 322 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 C22orf15Q8WYQ4 148 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 DNASE1L2Q92874 299 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 LRRC58Q96CX6 371 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CEP295NLQ96MC4 621 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 IL12RB2Q99665 862 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 NPAS2Q99743 824 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PI4K2AQ9BTU6 479 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ABCD2Q9UBJ2 740 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 WASF2Q9Y6W5 498 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 OR2AT4A6NND4 320 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 SPATA31C2B4DYI2 1134 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 GRIN3BO60391 1043 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 GNAO1P09471 354 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 USP17L8P0C7I0 530 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 HK1P19367 917 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 TBXAS1P24557 533 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 HTR3AP46098 478 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 JAK3P52333 1124 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 NAB1Q13506 487 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 RHEBQ15382 184 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 IQCCQ4KMZ1 466 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 CTXN3Q4LDR2 81 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 LDLRAP1Q5SW96 308 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 LYRM7Q5U5X0 104 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 XKRXQ6PP77 449 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF627Q7L945 461 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 TMEM156Q8N614 296 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 OR9K2Q8NGE7 335 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 OR10T2Q8NGX3 314 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ZSWIM3Q96MP5 696 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 PPP1R2P1Q96PQ5 205 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 KXD1Q9BQD3 176 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 TAF1DQ9H5J8 278 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ETNK1Q9HBU6 452 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 EPB41L4AQ9HCS5 686 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-202ENST00000375405 SERTAD4Q9NUC0 356 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 UNC13CQ8NB66 2214 aa4.65□□□□□ -1.67
SCN1A-202ENST00000375405 ZMYM6O95789 1325 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 FRMPD4Q14CM0 1322 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ADCY9O60503 1353 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ZMYM4Q5VZL5 1548 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 TLL1O43897 1013 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 SEC22BO75396 215 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 IFNA21P01568 189 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 IFNGP01579 166 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MT-ND5P03915 603 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 NT5EP21589 574 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 LTKP29376 864 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MYBPHQ13203 477 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MRPL49Q13405 166 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PLEKHG6Q3KR16 790 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 DCST1Q5T197 706 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 PRPF38BQ5VTL8 546 aaKnown RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 MRNIPQ6NTE8 343 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 ZNF746Q6NUN9 644 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-202ENST00000375405 GALNT15Q8N3T1 639 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 LPIN2Q92539 896 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 SEMA4DQ92854 862 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 TEKT5Q96M29 485 aa4.64□□□□□ -1.67
SCN1A-202ENST00000375405 APOL4Q9BPW4 351 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms